Team:Warsaw/Calendar-Main/15 April 2009

From 2009.igem.org


Previous day
return to main notebook page
Previous entry
next notebook entry

 



Cloning of the mgtc promoter into the pKSII+ plasmid

Kamil


Tasks:

  • Amplification of mgtc and hly

Methods:

  • PCR mixture's composition:

     
    2ul buffer 
    1ul MgCl2 
    0,5ul primers 
    1,5ul dNTPs (10 mM) 
    01,ul polymerase
    

    Solution was topped up with H2O to 20ul.

    2 repeats of every sample were made.

  • PCR programs:
  • mgtc

    90s 95°C 
    (30s 95°C, 35s 48°C, 60s 72°C)x2
    (30s 95°C, 35s 58°C, 60s 72°C)x28
    600s 72°C
    ~ 4°C

    hly

    90s 95°C 
    (30s 95°C, 35s 42°C, 150s 72°C)x2
    (30s 95°C, 35s 47°C, 150s 72°C)x28
    600s 72°C
    ~ 10°C
  • Electrophoretic separation on 1% agarose gel

Results:

  • Gel (from left)
  1. GeneRuler DNA Ladder Mix #SM0333 (Fermentas)
  2. mgtc 1 repeat
  3. mgtc 2 repeat
  4. mgtc control -
  5. hly 1 repeat
  6. hly 2 repeat
  7. hly control -

Notes:

  • Inappropriate template DNA was used for mgtc (ganomic DNA from Yersinia instead of genomic DNA from Listeria).



April
MTWTFSS
    1 2 3 4 5
6 7 8 9 10 11 12
13 14 15 16 17 18 19
20 21 22 23 24 25 26
27 28 29 30
May
MTWTFSS
        1 2 3
4 5 6 7 8 9 10
11 12 13 14 15 16 17
18 19 20 21 22 23 24
25 26 27 28 29 30 31
June
MTWTFSS
1 2 3 4 5 6 7
8 9 10 11 12 13 14
15 16 17 18 19 20 21
22 23 24 25 26 27 28
29 30
July
MTWTFSS
    1 2 3 4 5
6 7 8 9 10 11 12
13 14 15 16 17 18 19
20 21 22 23 24 25 26
27 28 29 30 31
August
MTWTFSS
          1 2
3 4 5 6 7 8 9
10 11 12 13 14 15 16
17 18 19 20 21 22 23
24 25 26 27 28 29 30
31
September
MTWTFSS
  1 2 3 4 5 6
7 8 9 10 11 12 13
14 15 16 17 18 19 20
21 22 23 24 25 26 27
28 29 30
October
MTWTFSS
      1 2 3 4
5 6 7 8 9 10 11
12 13 14 15 16 17 18
19 20 21 22 23 24 25
26 27 28 29 30 31