Team:UC Davis/Contacts References

              <b style="color: rgb(255, 255, 153);"><span style="font-size: 13.5pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;">   <img alt="" src="http://2009.igem.org/wiki/images/b/b9/UCDAVIS_PIC8.png" style="border: 0px solid ; width: 78px; height: 36px;"></a>   </b><b style="color: rgb(255, 255, 153);"><span style="font-size: 13.5pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;">   <img alt="" src="http://2009.igem.org/wiki/images/2/2f/UCDAVIS_PIC5.png" style="border: 0px solid ; width: 81px; height: 36px;"></a>   </b><b style="color: rgb(255, 255, 153);"><span style="font-size: 13.5pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"> </b><b style="color: rgb(255, 255, 153);"><span style="font-size: 13.5pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;">   <img alt="" src="http://2009.igem.org/wiki/images/a/a6/UCDAVIS_PIC6.png" style="border: 0px solid ; width: 78px; height: 37px;"></a> <img alt="" src="http://2009.igem.org/wiki/images/1/1d/UCDAVIS_PIC7.png" style="border: 0px solid ; width: 83px; height: 37px;"></a>   </b><b style="color: rgb(0, 0, 0);"><span style="font-size: 13.5pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"> </b> <hr style="width: 100%; height: 2px;"> <span style="font-weight: bold; text-decoration: underline;">Contacts/References: <hr style="width: 100%; height: 2px;"> <span style="font-weight: bold; text-decoration: underline;"> <div style="text-align: center; font-family: Helvetica,Arial,sans-serif;"><big style="font-style: italic;"> Contacts  </a> <hr style="width: 100%; height: 2px;"> <u style="font-weight: bold; font-style: italic;"><span style="font-size: 24pt; font-family: &quot;Showcard Gothic&quot;;"><small style="font-family: Helvetica,Arial,sans-serif;">References:  <span style="font-size: 24pt; font-family: &quot;Showcard Gothic&quot;;"><o:p></o:p> </b> <p style="color: rgb(0, 0, 0); text-align: left;" class="MsoNormal"> <span style="font-size: 12pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"><span style="font-weight: bold;">1.  Ze-Chun Yuan, Pu Liu, Panatda Saenkham, Kathleen Kerr, and Eugene W. Nester (</b>2007). Transcriptome Profiling and Fuctional Analysis of Agrobacterium tumefaciens Reveals a General Conserved Response to Acidic Conditions (pH 5.5) and a Complex Acid-Mediated Signaling Involved in Agrobacterium -Plant Interactions. Journal of Bacteriology. 190(2). p. 494-507. <p style="color: rgb(0, 0, 0); text-align: left;" class="MsoNormal"> <span style="font-size: 12pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"><span style="font-weight: bold;">2 .Luoping Li, Yonghui Jia, Qingming Hou, Trevor C. Charles, Eugene W. Nester, and Shen Q. Pan. (</b>2002). A global pH sensor: Agrobacterium sensor protein ChvG regulates acid-inducible genes on its two chromosomes and Ti plasmid. PNAS. 99(19).12369-12374 <p style="color: rgb(0, 0, 0); text-align: left;" class="MsoNormal"> <span style="font-size: 12pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"><span style="font-weight: bold;">3.  Nicholas J. Mantis and Stephen C. Winans. </b> (1993), The Chromosomal Response Regulatory Gene chvI of Agrobacterium tumefaciens Complements an Escherichia coli phoB Mutation and Is Required for Virulence. Journal of Bacteriology. 175(20). p.6626-6636. <p style="color: rgb(0, 0, 0); text-align: left;" class="MsoNormal"> <span style="font-size: 12pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"><span style="font-weight: bold;">4.  Trevor C. Charles and Eugene W. Nester.</b> (1993). A Chromosomally Encoded Two-Component Sensory Transduction System Is Required for Virulence of Agrobacterium tumefaciens. <span style="text-decoration: underline;">Journal of Bacteriology .175(20) p. 6614-6625. <p style="color: rgb(0, 0, 0); text-align: left;" class="MsoNormal"> <span style="font-size: 12pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;">5.Jeffrey M. Skerker, Barrett S. Perchuk, Albert Siryaporn, Emma A. Lubin, Orr Ashenberg, Mark Goulian and Michael T. Laub. (2008). </b>Rewiring the Specificity of Two-Component Signal Transduction Systems. <span style="text-decoration: underline;">Cell. (133)6. pp.1043-1054. <span style="font-size: 12pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"><o:p></o:p> <span style="font-size: 13.5pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"> 6 . <span style="font-size: 12pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;">Takashi Aoyama, Mituru Takanami, Kozo Makino, and Atsuhiro Oka </b><span style="font-size: 13.5pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;">. </b><span style="font-size: 13.5pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;">( <span style="font-size: 12pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;">1991) <span style="font-size: 13.5pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;">. <span style="font-size: 12pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;">Cross-talk between the virulence and phosphate regulons of Agrobacterium tumefaciens caused by an unusual interaction of the transcriptional activator with a regulatory DNA element. .<span style="font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"><span style="text-decoration: underline;">  <span style="font-size: 12pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"><span style="text-decoration: underline;">Mol. Gen. Genet. (1991). 227(3), pp.385-390. <span style="font-size: 18pt; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"><o:p></o:p> <span style="font-size: 12pt; line-height: 115%; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"> 7.  Edwin van Bloois. Remko T. Winter. Dick B. Janssen, Marco W. Fraaije. 2009</b>, Export of functional Streptomyces coelicolor alditol oxidase to the periplasm or cell surface of Escherichia coli and its application in whole-cell biocatalysis. (2009). <span style="text-decoration: underline;">Appl. Microbiol. Biotechnol. . (2009). 83(4). p. 679-687.<o:p></o:p> <p style="color: rgb(0, 0, 0); text-align: left;" class="MsoNormal"> <span style="font-size: 12pt; line-height: 115%; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"><span style="font-weight: bold;">8 .Dariusz Stepniak, Liesbeth Spaenij-Dekking, Cristina Mitea, Martine Moester, Arnoud de Ru, Renee Baak-Pablo, Peter van Veelen, Luppo Edens and Frits Koning. </b>(2006). Highly efficient gluten degradation with a newly identified prolyl endoprotease: implications for celiac disease. <span style="text-decoration: underline;">Am J Physiol Gastrointest Liver Physiol. (2006).291(4): G621-G629.<o:p></o:p> <span style="font-size: 12pt; line-height: 115%; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"> 9. Heung-Chae Junge, Joon-Hyun Park, Seung-Hwan Park, Jean-Michel Lebeault, and Jae-Gu Pan </b><span style="font-size: 12pt; line-height: 115%; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;">. (1998). Expression of carboxymethylcellulase on the Surface of Escerichia coli using Pseudomonas syringae ice nucleation protein. Enzyme and Microbial Technology. (1998). 22(5): 348-354. <p style="color: rgb(0, 0, 0); text-align: left;" class="MsoNormal"> <span style="font-size: 12pt; line-height: 115%; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"><span style="font-weight: bold;">10. <b> Michael Klose, Anja St&ouml;riko, York-Dieter Stierhof, Ingrid Hindennach, Bettina Mutschler, and Ulf Henning</b>. (1993). Membrane Assembly of the Outer Membrane Protein OmpA of Escherichia coli. Journal of Biological Chemistry. 268(34). pp. 25664-25670. <p style="color: rgb(0, 0, 0); text-align: left;" class="MsoNormal"> <span style="font-size: 12pt; line-height: 115%; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"><span style="font-weight: bold;">11. The Celiac Site. (2009). http://www.theceliacsite.com/ <p style="color: rgb(0, 0, 0); text-align: left;" class="MsoNormal"> <span style="font-size: 12pt; line-height: 115%; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"><span style="font-weight: bold;">12. <b>Jonathan Gass, Michael T. Bethune, Matthew Siegel, Andrew Spencer, and Chaitan Khosla</b>. (2007). Combination Enzyme Therapy for Gastric Digestion of Dietary Gluten in Patients With Celiac Sprue. <span style="text-decoration: underline;">Gastroenterology. 2007; 133: 472-480. <p style="color: rgb(0, 0, 0); text-align: left;" class="MsoNormal"> <span style="font-size: 12pt; line-height: 115%; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"><span style="font-weight: bold;">13. <b>Roland Freud, Michael Klose, and Ulf Henning.</b> (1989). Export and Sorting of the Escherichia coli Outer Membrane Protein OmpA. <span style="text-decoration: underline;">Journal of Bioenergetics and Biomembranes. 22 (3). pp.441-449. <p style="color: rgb(0, 0, 0); text-align: left;" class="MsoNormal"> <span style="font-size: 12pt; line-height: 115%; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"><span style="font-weight: bold;">14. <b>National Digestive Diseases Information Clearinghouse (NDDIC)</b>.(September 2008). http://digestive.niddk.nih.gov/ddiseases/pubs/celiac/ <p style="color: rgb(0, 0, 0); text-align: left;" class="MsoNormal"> <span style="font-size: 12pt; line-height: 115%; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"><span style="font-weight: bold;">15. <font face="Times New Roman" size="5"> <b>Se Whan Park, Moon Gyu Chung, Hwa Young Lee, Jeong Yoon Kim, and Young Ha Rhee. </b> (2008). Stable expression and secretion of the polyhydroxybutyrate depolymerase of Paucimonas lemoignei in <i>Escherichia coli. </i> J. Microbiology. 46(6). pp. 662-669. <span style="font-size: 12pt; line-height: 115%; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"><span style="font-weight: bold;"> <hr style="width: 100%; height: 2px;"> <p style="color: rgb(0, 0, 0); text-align: left;" class="MsoNormal"> <span style="font-size: 12pt; line-height: 115%; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"> <b> <span style="font-size: 22pt; line-height: 115%; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;;"> </b> <font size="+1"><span style="font-size: 12pt; line-height: 115%; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;; color: rgb(0, 0, 0); font-weight: bold;">Safety: <ol> <li style="text-align: left;">Would any of your project ideas raise safety issues in terms of: <ul> <li>researcher safety, NONE </li> <li>public safety, or NONE </li> <li>environmental safety? NONE </li> </ul> </li> <li style="text-align: left;">Is there a local biosafety group, committee, or review board at your institution? <span style="font-weight: bold;">YES </li> <li style="text-align: left;">What does your local biosafety group think about your project? THEY FIND IT SAFE - REGULAR LAB STRAIN ECOLI AND GFP </li> <li> Do any of the new BioBrick parts that you made this year raise any safety issues? <span style="font-weight: bold;">NO <ul style="text-align: left;"> <li>If yes, did you document these issues in the Registry? <span style="font-weight: bold;">N/A </li> </ul> </li> </ol> <p style="color: rgb(0, 0, 0); text-align: left;" class="MsoNormal"><span style="font-size: 12pt; line-height: 115%; font-family: &quot;Times New Roman&quot;,&quot;serif&quot;; color: rgb(0, 0, 0);"> <span style="color: rgb(255, 255, 0);">