Minnesota/11 June 2009

From 2009.igem.org

(Difference between revisions)
(New page: {|style="align:left" width="965" |- |''' Back to Notebook Home''' |- |'''Go to Previous Day (June 10)'''|| width=158|'''[[Minnesota/...)
Line 5: Line 5:
|'''[[Minnesota/10 June 2009|Go to Previous Day (June 10)]]'''|| width=158|'''[[Minnesota/12 June 2009|Go to Next Day (June 12)]]'''
|'''[[Minnesota/10 June 2009|Go to Previous Day (June 10)]]'''|| width=158|'''[[Minnesota/12 June 2009|Go to Next Day (June 12)]]'''
|}
|}
 +
Most group members continued to learn MATLAB, Linux commands, and html as issues presented themselves. One major setback was the realization that designgui could not produce non-linear parameter variation. This is unfortunate for the following reason:<br><br>
 +
 +
Essentially, the aTc concentrations in the models without a lac operon vary from 0 to 260 molecules per cell, but not linearly. The concentrations tested are 0, 1, 13, 65, 130, 260 molecules per cell. Without the ability to vary this parameter non-linearly we are forced to created 6 separate .nc-files for each model we run through the supercomputer. A work around will try to be  determined, or the designGUI modified in order to facilitate this in the coming weeks.

Revision as of 19:22, 29 July 2009

Back to Notebook Home
Go to Previous Day (June 10)Go to Next Day (June 12)

Most group members continued to learn MATLAB, Linux commands, and html as issues presented themselves. One major setback was the realization that designgui could not produce non-linear parameter variation. This is unfortunate for the following reason:

Essentially, the aTc concentrations in the models without a lac operon vary from 0 to 260 molecules per cell, but not linearly. The concentrations tested are 0, 1, 13, 65, 130, 260 molecules per cell. Without the ability to vary this parameter non-linearly we are forced to created 6 separate .nc-files for each model we run through the supercomputer. A work around will try to be determined, or the designGUI modified in order to facilitate this in the coming weeks.