Team:Alberta/Project/Modeling/start

From 2009.igem.org

(Difference between revisions)
 
Line 1: Line 1:
  % start script
  % start script
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+
  changeCobraSolver('glpk'); %can use any solver that is supported
  changeCobraSolver('glpk'); %can use any solver that is supported
  model = readCbModel() %('Ec_iAF1260_flux1.xml')
  model = readCbModel() %('Ec_iAF1260_flux1.xml')

Latest revision as of 00:23, 18 October 2009

% start script

changeCobraSolver('glpk'); %can use any solver that is supported
model = readCbModel() %('Ec_iAF1260_flux1.xml')
solution1 = optimizeCbModel(model, 'max', 'false', 'false');
essgenes=cell(1)
InitialGrowthRate = solution1.f