Team:EPF-Lausanne/Notebook/Wet Lab

From 2009.igem.org

(Difference between revisions)
(08.07.09)
(Removing all content from page)
 
(126 intermediate revisions not shown)
Line 1: Line 1:
-
{{EPF-Lausanne09}}
 
-
<div CLASS="epfltrick">__TOC__
 
-
</div><div CLASS="epfl09">
 
-
=Wet Lab=
 
-
==July==
 
-
===06.07.09===
 
-
LOVTAP plasmid AND TrpR plasmid were transformed in competent E. Coli following received protocol, and grown overnight (see Lab book for more details).
 
-
<br>One problem: we actually don't know TrpR plasmid resistance, so we tried with three resistances available in the lab: Amp., Kana. and Chl.
 
-
LOVTAP is in a plasmid called pCal-n (see picture below):
 
-
 
-
[[Image: pCAL-n.jpg|500px|thumb|center|pCal-n plasmid]]
 
-
 
-
<br>Some comments on the plasmid:
 
-
<br>-CBP is a small peptide with which we could purify LOVTAP protein
 
-
<br>-Thrombin target is a nucleotidic sequence that can be recognized by thrombin a peptidase. This peptidase will cut CBP once LOVTAP is purified
 
-
 
-
===07.07.09===
 
-
We have to grow the 3 strains generously sent by [mailto:j.beatty@ubc.ca Tom Beatty]
 
-
 
-
The three strains are :
 
-
:*''R.Palustris'' CEA001 (wild type) ; should be grown on LB medium only
 
-
:*''R.Palustris'' BPHP1+ ; should be grown on LB with gentamycin (100 micrograms/ml)
 
-
:*''E.Coli'' DH10B (pBPH/hmu0) ; should be grown on LB with gentamycin (20 micorgrams/ml)
 
-
 
-
 
-
The transformed LOVTAP and TrpR worked well (N.B. the plasmid of TrpR is pUC19 so the antibiotic resistance is Amp -> see below)
 
-
 
-
 
-
 
-
[[Image: RTEmagicC_puc19_2.gif.gif|500px|thumb|center|pUC19 plasmid]]
 
-
 
-
 
-
We did the glycerol stock, located in the -80 fridge, first floor of the iGEM compartement.
 
-
 
-
Then, a miniprep was done with both cultures.
 
-
A LOVTAP plasmid aliquot was done, a TrpR plasmid aliquot was done, located in the -20 fridge, 2nd floor.
 
-
 
-
===08.07.09===
 
-
1. R. Palustris culture grew. A glycerol stock has been done.
 
-
A pellet is on the fridge level 2, waiting for a miniprep.
 
-
 
-
2. iGEM parts have been transformed:
 
-
<br>- BBa_B0010 (terminator), resistance: A, well kit plate 1: 13D
 
-
<br>- BBa_R0010 (promoter LacI),  resistance: A, well kit plate 1: 1D
 
-
<br>- BBa_B0030 (RBS),  resistance: A, well kit plate 1: 1H
 
-
<br>- BBa_E0240 (RBS-GFP-TER),  resistance: A, well kit plate 1: 12M
 
-
<br>- BBa_I13507(RBS-mRFP-TER),  resistance: A, well kit plate 1: 22O
 
-
<br>- BBa_J13002(pTetR-RBS),  resistance: A, well kit plate 1: 13B
 
-
<br>- BBa_I6007 (inverter TetR),  resistance: A, well kit plate 2: 1C
 
-
 
-
{| class="wikitable" width="80%" align="center"
 
-
|+ Parts&Characteristics
 
-
|-
 
-
! scope=col | Part
 
-
! scope=col | Resistance
 
-
! scope=col | Well (Kit Plate)
 
-
|-
 
-
| width="33%" |
 
-
BBa_B0010 (terminator)
 
-
| width="34%" |
 
-
A
 
-
| width="35%" rowspan="2" |
 
-
13D (1)
 
-
|-
 
-
| width="33%" |
 
-
BBa_R0010 (promoter LacI)
 
-
| width="34%" |
 
-
A
 
-
|-
 
-
| align="center" colspan="3" |
 
-
Ligne 1
 
-
|}
 
-
 
-
===09.07.09===
 
-
 
-
===10.07.09===
 
-
 
-
==August==
 
-
 
-
</div><div CLASS="epfl09bouchon"></div>
 

Latest revision as of 08:05, 28 July 2009