From 2009.igem.org
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This page shows results of BLAST with the database of the DH10B genome. In every case the nucleotide sequence was tried first, if the result was unclear the amino acid sequence was tried.
References
ArsA
>gi|17530571:46163-47914 IncN plasmid R46, complete sequence
ATGAAATTCTTAGAGAATATCCCGTCTTACCTGTTTTTCACCGGTAAGGGAGGTGTAGGCAAAACTTCGA
TTTCCTGCGCAACGGCTATACGTCTGGCTGAACTGGGAAAGCGTGTTCTGCTTGTCAGTACCGACCCGGC
TTCCAATGTCGGTCAGGTATTCGATCAGACTATCGGTAACACTATCCAGCCCGTGACTGCTGTGTCTGGT
CTTTCGGCTCTGGAGATTGACCCGCAGGACGCCGCCCAGCAATACCGCGCCAGAATCGTTGACCCTATTA
TAGGTCTTTTGCCTGATGACGTTGTTAACAGCATCAGTGAACAGCTTTCAGGAGCTTGTACGACAGAGAT
CGCTGCATTCGACGAGTTTACTGGCTTACTGACTGACGCTTCTCTGCTGACCCGCTTTGATCACATCATT
TTTGATACTGCCCCAACTGGCCACACTATTCGCCTTCTTCAGCTTCCCGGAGCCTGGAGCAGCTTCATCG
AAAGTAACCCGGATGGTGCTTCCTGTCTTGGTCCAATGGCTGGGCTGGAAAAACAACGCGAGCAATATGC
TCATGCGGTTGAGGCATTATCCGATCCTGAACGAACTCGCCTTGTGCTGGTCGCGCGATTGCAAAAATCA
ACACTGCAGGAAGTCGCTCGTACTCATGACGAATTATCAGCTATTGGCCTTAAAAATCAGTATTTAGTCA
TTAACGGTGTCCTGCCTGCGAGCGAAGAGAAACGTGATGCACTGGCCGCTGCAATATGGCAACGGGAGCA
AGAGGCGCTGGCAAATCTTCCTGCCGGGTTATCTGATTTGCCGACAGACAACTTATACCTGCAGCCGCTG
AACATGGTTGGTGTATCCGCATTGAAAGGCCTGCTCAACGAACACGCTGAGATAACATCGCTTCCTGAAC
AAAGCCCACAGAACAAGCCAGAGAATATGTCGTTGTCTGTCCTGGTTGATGATATCGCCCGCAGTGAACA
CGGTTTGATTATGCTGATGGGCAAAGGTGGTGTGGGCAAAACCACAATGGCTGCGGCTATCGCCGTCAGT
CTGGCGGATAAGGGTTTTAATGTGCATCTCACCACCTCAGATCCTGCTGCACATCTCAGTACAACGCTCA
ATGGCAGCCTCAAAAATCTGCAGGTCAGCCGAATCAACCCTCACGATGAAACTGAACGCTATCGTCAGCA
TGTTCTTGAGACGAAAGGCAGGGATCTGGATGAGGCTGGGAAACGGCTGCTCGAAGAGGATTTACGTTCT
CCTTGCACAGAAGAGATTGCGGTGTTCCAGGCGTTTTCACGCGTAATTCGTGAAGCTGGCAAACGGTTTG
TGGTCATGGATACGGCACCTACCGGGCATACGCTATTACTGCTTGATGCTACCGGGGCTTATCACCGTGA
GATTGCCAGGAAGATGGGGGATAAAGGGCATTTTACCACTCCGATGATGCAGCTTCAGGACCAGGAACGT
ACCAAAGTTTTGCTGGTCACTCTGCCTGAAACCACACCTGTACTGGAAGCGGCAAACCTGCAGTCCGATC
TTGAACGTGCGGGGATTCATCCCTGGGGCTGGATTATCAATAACAGCCTTTGGATTGCACAGACGCAATC
GCCGCTGCTTTGCCAGCGCGCCCTACAAGAGCGTCCTCAAATCGAGGTTGTGAAAAACCAGCATGCAAGC
CGCATAGCGTTAGTACCGGTAATGGCTGCAGAGCCCACTGGCATCGAGAAACTCAGAGAGCTGGTTGTTT
AA
|
>Ecoli20030128.Contig192.fa
Length = 19353
Score = 36.2 bits (18), Expect = 0.11
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 770 aagaggcgctggcaaatc 787
||||||||||||||||||
Sbjct: 19144 aagaggcgctggcaaatc 19161
|
>gi|151856:184-1935 Plasmid R773 arsenical resistance operon genes, arsA, arsB and arsC, complete cds
ATGCAATTCTTACAGAATATCCCCCCTTATCTGTTTTTTACGGGTAAAGGAGGCGTGGGTAAAACCTCTA
TTTCCTGCGCCACGGCGATCCGTCTGGCAGAACAGGGGAAACGGGTGCTGCTGGTCAGTACCGATCCGGC
CTCAAACGTAGGCCAGGTGTTTAGCCAGACGATTGGCATTACCATTCAGGCAATAGCCTCTGTTCCTGGA
TTGTCGGCTCTTGAGATTGATCCTCAGGCTGCTGCACAACAGTACCGGGCCAGAATCGTTGACCCTATTA
AAGGCGTCCTGCCTGATGACGTTGTTTCCAGCATCAACGAACAACTGTCAGGTGCATGCACAACAGAGAT
TGCGGCTTTTGATGAATTTACCGGATTACTGACAGATGCCTCTCTGCTGACGCGGTTTGACCATATCATT
TTTGATACCGCGCCGACGGGTCACACCATTCGCCTTCTGCAGTTGCCGGGCGCCTGGAGTAGCTTTATTG
ACAGCAATCCCGAGGGCGCGTCCTGTCTCGGCCCAATGGCGGGGCTGGAAAAGCAGCGTGAACAGTATGC
CTATGCTGTTGAAGCGTTGTCTGATCCAAAGCGTACCCGACTGGTATTAGTTGCTCGTCTGCAAAAATCC
ACGTTGCAGGAAGTCGCCCGGACTCATCTGGAACTTGCCGCCATCGGCCTTAAAAATCAGTACCTGGTTA
TTAATGGCGTTCTGCCCAAAACTGAAGCGGCAAACGATACACTGGCTGCTGCAATATGGGAGCGTGAACA
GGAGGCGCTGGCCAATCTTCCCGCTGATCTTGCAGGTTTGCCAACTGACACATTATTTCTCCAGCCGGTC
AATATGGTCGGTGTGTCTGCGCTCAGCAGGCTTCTCTCCACTCAGCCTGTAGCGTCGCCATCCTCGGATG
AATACCTGCAACAGCGGCCTGATATTCCGTCACTTTCTGCGTTGGTTGATGATATTGCCCGTAATGAACA
TGGCCTGATTATGCTGATGGGTAAAGGTGGCGTGGGGAAAACCACGATGGCTGCTGCCATTGCTGTCAGG
CTGGCCGACATGGGATTTGATGTCCATCTGACAACATCTGATCCTGCGGCGCATCTCAGCATGACCCTGA
ACGGTAGCCTTAACAACCTGCAGGTCAGCAGGATCGATCCTCACGAGGAAACGGAACGCTATCGTCAGCA
TGTTCTTGAAACAAAGGGAAAAGAACTGGACGAAGCGGGAAAACGCCTGCTGGAAGAGGACTTACGCTCA
CCTTGCACTGAGGAAATTGCTGTTTTCCAGGCCTTTTCACGGGTGATTCGTGAAGCGGGTAAACGTTTCG
TGGTGATGGATACGGCTCCGACCGGACACACGCTGTTGCTGCTGGATGCTACAGGCGCGTACCACCGCGA
AATTGCGAAGAAAATGGGAGAAAAAGGCCATTTCACCACACCGATGATGCTGCTTCAGGATCCGGAGCGC
ACTAAAGTGTTACTGGTCACGCTGCCGGAAACCACGCCCGTGCTTGAAGCGGCAAATTTACAGGCCGACC
TTGAGCGTGCAGGCATTCACCCCTGGGGCTGGATTATCAATAACAGCCTTTCCATTGCGGATACCCGTTC
GCCACTGCTTCGTATGCGGGCACAACAGGAACTTCCGCAGATAGAGAGCGTTAAACGCCAGCACGCCAGC
CGTGTCGCTCTTGTTCCCGTACTGGCGTCAGAACCAACCGGCATCGACAAACTCAAACAACTTGCTGGGT
AA
|
>Ecoli20030128.Contig569.fa
Length = 7803
Score = 34.2 bits (17), Expect = 0.44
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1668 ccagcacgccagccgtg 1684
|||||||||||||||||
Sbjct: 6734 ccagcacgccagccgtg 6718
|
ArsB
>gi|17530571:47964-49253 IncN plasmid R46, complete sequence
ATGTTACTGGCAGGCGCTATTTTTGTCCTGACCATCGTTTTGGTTATCTGGCAACCGAAGGGATTAGGGA
TCGGCTGGAGTGCGACGCTGGGCGCGGTACTGGCGCTGATCTCTGGCGTAGTCCATATTGGTGATATCCC
TGTAGTGTGGAATATTGTCTGGAATGCGACGGCGACCTTTATTGCCGTGATTATTATCAGCCTTCTGCTC
GATGAATCGGGCTTTTTCGAATGGGCGGCGCTGCACGTTTCACGTTGGGGTAACGGTCGCGGGCGTTTGC
TGTTTACCTATATCGTTTTGCTCGGCGCAGCGGTGGCGGCACTGTTTGCCAACGATGGTGCGGCATTGAT
TCTGACGCCAATTGTTATCGCCATGCTGCTTGCATTAGGTTTCAGCAAAGGCACTACGCTGGCATTTGTC
ATGGCCGCCGGGTTTATTGCCGATACGGCCAGTCTGCCGCTTATCGTGTCCAACCTGGTTAACATCGTTT
CTGCAGACTTCTTTGGGCTGGGTTTCACTGAGTATGCGTCGGTAATGGTGCCGGTGGATATCGCAGCCAT
TATCGCCACGCTGGTGATGCTGCATCTGTTCTTCCGCAAAGATATTCCGCCAACTTACGACCTGGCTCTC
CTGAAAGCACCGGCAAAAGCGATTAAAGATCTGGCAACCTTCAGAACCGGCTGGATAGTGTTGATCCTTC
TTCTGGTTGGCTTTTTCGTCCTTGAGCCGTTGGGTATCCCGGTCAGTGCGATTGCTGCTGTAGGGGCTGT
CATTCTGTTTGCGGTGGCGAATCGAGGCCATGCCATTAACACTGGCAAAGTGCTTCGCGGTGCGCCATGG
CAGATCGTCATATTCTCTCTGGGAATGTATCTGGTGGTCTATGGTCTGCGTAATGCCGGACTAACAGAAT
ACCTCTCCGGTGTGTTGAACGTGCTGGCAGATAAAGGACTTTGGGCCGCGACGTTTGGTACTGGCTTCCT
GACGGCTTTCCTCTCTTCCATCATGAACAATATGCCTACCGTGCTGGTTGGTGCTCTCTCTATTGATGGC
AGCACTGCAACAGGCGTTATCAAAGAGGCGATGATTTTTGCCAACGTGATTGGCTGCGATCTTGGACCGA
AAATTACACCTATTGGTAGCCTGGCAACGTTGCTCTGGCTGCATGTCCTTTCACAGAAGAACATGACCAT
CACATGGGGATACTATTTCCGCACCGGGATCGTCATGACTCTGCCTGTGCTGTTTGTAACGCTGGCCGCG
CTGGCGCTACGTCTCTCTTTCACTTTGTAA
|
>Ecoli20030128.Contig618.fa
Length = 9618
Score = 728 bits (367), Expect = 0.0
Identities = 1062/1291 (82%), Gaps = 2/1291 (0%)
Strand = Plus / Plus
Query: 1 atgttactggcaggcgctatttttgtcctgaccatcgttttggttatctggcaaccgaag 60
|||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||
Sbjct: 6043 atgttactggcaggcgctatctttgtcctgaccatcgtattggttatctggcagccgaaa 6102
Query: 61 ggattagggatcggctggagtgcgacgctgggcgcggtactggcgctgatctctggcgta 120
|| ||||| |||||||||||||| ||||| ||||| ||||||||| | | | |||||
Sbjct: 6103 ggtttaggcatcggctggagtgcaacgctcggcgcagtactggcgttagttacgggcgtg 6162
Query: 121 gtccatattggtgatatccctgtagtgtggaatattgtctggaatgcgacggcgaccttt 180
|||||| |||||||| || || ||||||||||| |||||||| |||||||| | |||
Sbjct: 6163 gtccatccgggtgatattccggtggtgtggaatatcgtctggaacgcgacggctgcgttt 6222
Query: 181 attgccgtgattattatcagccttctgctcgatgaatcgggctttttcgaatgggcggcg 240
|| ||||| ||||| |||||||| ||||| ||||| || |||||||| ||||||||||||
Sbjct: 6223 atcgccgtcattatcatcagcctgctgctggatgagtccggcttttttgaatgggcggcg 6282
Query: 241 ctgcacgtttcacgttggggtaacggtcgcgggcgtttgctgtttacctatatcgttttg 300
|||||||| ||||| |||||||| ||||| || || ||||||||||||| || || ||
Sbjct: 6283 ctgcacgtctcacgctggggtaatggtcgtggtcgcttgctgtttacctggattgtcctg 6342
Query: 301 ctcggcgcagcggtggcggcactgtttgccaacgatggtgcggcattgattctgacgcca 360
||||| || || || || || ||||||||||| ||||| ||||| | ||| |||| ||
Sbjct: 6343 ctcggtgctgccgttgccgccctgtttgccaatgatggcgcggcgcttattttgacaccg 6402
Query: 361 attgttatcgccatgctgcttgcattaggtttcagcaaaggcactacgctggcatttgtc 420
||||| |||||||||||||| || ||||| ||||| ||||||||||||||||| || ||
Sbjct: 6403 attgtcatcgccatgctgctggctttagggttcagtaaaggcactacgctggcgttcgtg 6462
Query: 421 atggccgccgggtttattgccgatacggccagtctgccgcttatcgtgtccaacctggtt 480
||||| ||||| || ||||||||||| ||||| ||||||||||| || |||||||||||
Sbjct: 6463 atggcggccggattcattgccgataccgccagcctgccgcttattgtctccaacctggtg 6522
Query: 481 aacatcgtttctgcagacttctttgggctggg-tttcactgagtatgcgtcggtaatggt 539
|| |||||||| || || |||||||| || || |||| | || || || ||||| |||||
Sbjct: 6523 aatatcgtttccgctgatttctttggcctcggctttcgc-gaatacgcctcggtgatggt 6581
Query: 540 gccggtggatatcgcagccattatcgccacgctggtgatgctgcatctgttcttccgcaa 599
||||||||||||||| || ||| | ||||||||||||||| | ||||| | || |||||
Sbjct: 6582 gccggtggatatcgccgcgattgttgccacgctggtgatgttacatctctattttcgcaa 6641
Query: 600 agatattccgccaacttacgacctggctctcctgaaagcaccggcaaaagcgattaaaga 659
||||||||||| | ||||| |||| || |||||| | || ||| ||||||| |||||
Sbjct: 6642 agatattccgcagaactacgatatggcgctgctgaaatctcccgcagaagcgatcaaaga 6701
Query: 660 tctggcaaccttcagaaccggctggatagtgttgatccttcttctggttggctttttcgt 719
|| || || |||| ||| |||||| | || || | ||||| ||||| || ||||||||
Sbjct: 6702 tcctgctacgttcaaaactggctgggttgttttactgcttctgctggtgggatttttcgt 6761
Query: 720 ccttgagccgttgggtatcccggtcagtgcgattgctgctgtaggggctgtcattctgtt 779
||| || ||| | || || ||||| || || ||||| ||||| || || | || | ||
Sbjct: 6762 cctggaaccgctcggcattccggtgagcgccattgcagctgtgggcgcgctgatattatt 6821
Query: 780 tgcggtggcgaatcgaggccatgccattaacactggcaaagtgcttcgcggtgcgccatg 839
|| || || || || || ||||| ||||| || || ||||| || |||||||| || ||
Sbjct: 6822 tgtcgtcgctaaacgcggtcatgcgattaatacgggtaaagtcctgcgcggtgccccctg 6881
Query: 840 gcagatcgtcatattctctctgggaatgtatctggtggtctatggtctgcgtaatgccgg 899
|||||| ||||| ||||| || || |||||||||||||| ||||| ||||| ||||||||
Sbjct: 6882 gcagattgtcatcttctcgctcggcatgtatctggtggtttatggcctgcgcaatgccgg 6941
Query: 900 actaacagaatacctctccggtgtgttgaacgtgctggcagataaaggactttgggccgc 959
| |||| ||||| || || || || | ||||||||||| ||||| || || ||||||||
Sbjct: 6942 attaacggaatatctttctggcgtactcaacgtgctggcggataacggcctgtgggccgc 7001
Query: 960 gacgtttggtactggcttcctgacggctttcctctcttccatcatgaacaatatgcctac 1019
|||| | || || || ||||| || || ||||||||||| || |||||||||||||| ||
Sbjct: 7002 gacgctcggcaccggattcctcaccgccttcctctcttctattatgaacaatatgccgac 7061
Query: 1020 cgtgctggttggtgctctctctattgatggcagcactgcaacaggcgttatcaaagaggc 1079
|| |||||||| || | || |||||||||||||| ||| | |||||||||||||| ||
Sbjct: 7062 ggtactggttggcgcgttgtccattgatggcagcacggcatctggcgttatcaaagaagc 7121
Query: 1080 gatgatttttgccaacgtgattggctgcgatcttggaccgaaaattacacctattggtag 1139
|||| ||| |||||| ||||||||||||||| | |||||||||||||| || ||||||||
Sbjct: 7122 gatggtttatgccaatgtgattggctgcgatttgggaccgaaaattaccccaattggtag 7181
Query: 1140 cctggcaacgttgctctggctgcatgtcctttcacagaagaacatgaccatcacatgggg 1199
|||||| ||| | ||||||||||| || ||||| |||||||| ||||| |||| |||||
Sbjct: 7182 cctggctacgctactctggctgcacgtactttcgcagaagaatatgactatcagctgggg 7241
Query: 1200 atactatttccgcaccgggatcgtcatgactctgcctgtgctgtttgtaacgctggccgc 1259
||| || ||||| || ||||| ||||||| ||||||||||||||||| |||||||| ||
Sbjct: 7242 atattacttccgtacagggattatcatgaccctgcctgtgctgtttgtgacgctggctgc 7301
Query: 1260 gctggcgctacgtctctctttcactttgtaa 1290
|||||||||||||||||||||||||||||||
Sbjct: 7302 gctggcgctacgtctctctttcactttgtaa 7332
|
>gi|151856:1984-3273 Plasmid R773 arsenical resistance operon genes, arsA, arsB and arsC, complete cds
ATGTTACTGGCAGGAGCCATTTTTATCCTGACCATCGTTTTGGTTATCTGGCAGCCGAAAGGATTAGGGA
TTGGCTGGAGCGCCACGTTGGGGGCTGTACTGGCTCTGGCGTCGGGTGTGATACACATTGCTGATATTCC
GGTGGTGTGGAATATTGTCTGGAACGCGACGGCAACATTTATCGCCGTTATTATCATCAGCCTGTTGCTG
GATGAGTCAGGCTTTTTCGAATGGGCAGCGTTGCACGTTTCTCGCTGGGGGAACGGTCGTGGCCGCCTGC
TGTTTACGTATATTGTTCTGCTCGGCGCGGCAGTGGCGGCACTGTTTGCCAACGATGGTGCGGCTCTTAT
TCTGACGCCGATTGTTATCGCCATGCTGCTGGCGCTTGGCTTCAGTAAAAGCACCACACTGGCATTCGTG
ATGGCTGCCGGGTTTATTTCCGATACTGCTAGCTTGCCGCTTATCGTATCGAACTTGGTCAATATCGTTT
CAGCTGATTTCTTCAAACTGGGATTCACGGAGTATGCTTCGGTGATGGTGCCGGTGGATATCGCCGCCAT
TATCGCCACGCTGGTGATGCTGCATCTTTTTTTCCGCAAAGATATCCCCCCCACTTATGAGCTGGCGCGA
CTGAAAGAACCTGCAAAAGCCATCAAAGATCCTGCGACGTTCAGAACCGGCTGGGTTGTTCTCCTCCTTC
TGCTGGTCGGTTTTTTTGTCCTTGAGCCGATGGGGATCCCTGTGAGTGCGATTGCAGCAGTGGGGGCGGC
AGTCCTGTTTGCGGTGGCCAAAAAAGGTCATGGTATTAACACCGGTAAAGTGCTGCGCGGCGCGCCCTGG
CAGATCGTGATCTTCTCTCTGGGGATGTATCTGGTGATCTACGGGTTGCGTAACGCCGGTCTGACAGATT
ATCTCTCTGACGTGCTGAACGAACTGGCAGATAAAGGACTGTGGGCCGCCACGCTGGGGACGGGATTCCT
GACAGCATTACTCTCTTCTATTATGAACAATATGCCGACAGTATTGATTGGCGCATTGTCAATTGATGGC
AGCACCGCGACCGGTGTTATCAAAGAGGCGATGATTTATGCCAACGTCATTGGCTGCGATCTGGGGCCGA
AAATCACCCCTATTGGTAGCCTGGCAACACTGCTCTGGCTGCATGTACTTTCACAGAAGAACATGACCAT
CACTTGGGGATACTATTTCCGCACCGGGATCGTCATGACTCTGCCTGTGCTGTTTGTAACGCTGGCCGCG
CTGGCGCTACGTCTCTCTGTCACATTGTAA
|
>Ecoli20030128.Contig618.fa
Length = 9618
Score = 355 bits (179), Expect = 7e-98
Identities = 416/495 (84%)
Strand = Plus / Plus
Query: 796 ggtcatggtattaacaccggtaaagtgctgcgcggcgcgccctggcagatcgtgatcttc 855
||||||| ||||| || |||||||| |||||||| || ||||||||||| || ||||||
Sbjct: 6838 ggtcatgcgattaatacgggtaaagtcctgcgcggtgccccctggcagattgtcatcttc 6897
Query: 856 tctctggggatgtatctggtgatctacgggttgcgtaacgccggtctgacagattatctc 915
|| || || |||||||||||| | || || |||| || ||||| | || || |||||
Sbjct: 6898 tcgctcggcatgtatctggtggtttatggcctgcgcaatgccggattaacggaatatctt 6957
Query: 916 tctgacgtgctgaacgaactggcagataaaggactgtgggccgccacgctggggacggga 975
|||| ||| || |||| ||||| ||||| || ||||||||||| ||||| || || |||
Sbjct: 6958 tctggcgtactcaacgtgctggcggataacggcctgtgggccgcgacgctcggcaccgga 7017
Query: 976 ttcctgacagcattactctcttctattatgaacaatatgccgacagtattgattggcgca 1035
||||| || || || ||||||||||||||||||||||||||||| ||| || |||||||
Sbjct: 7018 ttcctcaccgccttcctctcttctattatgaacaatatgccgacggtactggttggcgcg 7077
Query: 1036 ttgtcaattgatggcagcaccgcgaccggtgttatcaaagaggcgatgatttatgccaac 1095
||||| |||||||||||||| || | || ||||||||||| |||||| ||||||||||
Sbjct: 7078 ttgtccattgatggcagcacggcatctggcgttatcaaagaagcgatggtttatgccaat 7137
Query: 1096 gtcattggctgcgatctggggccgaaaatcacccctattggtagcctggcaacactgctc 1155
|| |||||||||||| |||| |||||||| ||||| |||||||||||||| || || |||
Sbjct: 7138 gtgattggctgcgatttgggaccgaaaattaccccaattggtagcctggctacgctactc 7197
Query: 1156 tggctgcatgtactttcacagaagaacatgaccatcacttggggatactatttccgcacc 1215
|||||||| |||||||| |||||||| ||||| |||| |||||||| || ||||| ||
Sbjct: 7198 tggctgcacgtactttcgcagaagaatatgactatcagctggggatattacttccgtaca 7257
Query: 1216 gggatcgtcatgactctgcctgtgctgtttgtaacgctggccgcgctggcgctacgtctc 1275
||||| ||||||| ||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 7258 gggattatcatgaccctgcctgtgctgtttgtgacgctggctgcgctggcgctacgtctc 7317
Query: 1276 tctgtcacattgtaa 1290
||| |||| ||||||
Sbjct: 7318 tctttcactttgtaa 7332
|
>gi|151858|gb|AAA21095.1| ArsB [Plasmid R773]
MLLAGAIFILTIVLVIWQPKGLGIGWSATLGAVLALASGVIHIADIPVVWNIVWNATATFIAVIIISLLL
DESGFFEWAALHVSRWGNGRGRLLFTYIVLLGAAVAALFANDGAALILTPIVIAMLLALGFSKSTTLAFV
MAAGFISDTASLPLIVSNLVNIVSADFFKLGFTEYASVMVPVDIAAIIATLVMLHLFFRKDIPPTYELAR
LKEPAKAIKDPATFRTGWVVLLLLLVGFFVLEPMGIPVSAIAAVGAAVLFAVAKKGHGINTGKVLRGAPW
QIVIFSLGMYLVIYGLRNAGLTDYLSDVLNELADKGLWAATLGTGFLTALLSSIMNNMPTVLIGALSIDG
STATGVIKEAMIYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTITWGYYFRTGIVMTLPVLFVTLAA
LALRLSVTL
|
>Ecoli20030128.Contig618.fa
Length = 9618
Score = 637 bits (1644), Expect = 0.0
Identities = 330/429 (76%), Positives = 350/429 (81%)
Frame = +1
Query: 1 MLLAGAIFILTIVLVIWQPKGLGIGWSATLGAVLALASGVIHIADIPVVWNIVWNATATF 60
MLLAGAIF+LTIVLVIWQPKGLGIGWSATLGAVLAL +GV+H DIPVVWNIVWNATA F
Sbjct: 6043 MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPGDIPVVWNIVWNATAAF 6222
Query: 61 IAVIIISLLLDESGFFEWAALHVSRWGNGRGRLLFTYIXXXXXXXXXXXXXXXXXXILTP 120
IAVIIISLLLDESGFFEWAALHVSRWGNGRGRLLFT+I ILTP
Sbjct: 6223 IAVIIISLLLDESGFFEWAALHVSRWGNGRGRLLFTWIVLLGAAVAALFANDGAALILTP 6402
Query: 121 IVIAMLLALGFSKSTTLAFVMAAGFISDTASLPLIVSNLVNIVSADFFKLGFTEYASVMV 180
IVIAMLLALGFSK TTLAFVMAAGFI+DTASLPLIVSNLVNIVSADFF LGF EYASVMV
Sbjct: 6403 IVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLVNIVSADFFGLGFREYASVMV 6582
Query: 181 PVDIAAIIATLVMLHLFFRKDIPPTYELARLKEPAKAIKDPATFRTGWXXXXXXXXXXXX 240
PVDIAAI+ATLVMLHL+FRKDIP Y++A LK PA+AIKDPATF+TGW
Sbjct: 6583 PVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAIKDPATFKTGWVVLLLLLVGFFV 6762
Query: 241 XEPMGIPXXXXXXXXXXXXXXXXKKGHGINTGKVLRGAPWQIVIFSLGMYLVIYGLRNAG 300
EP+GIP K+GH INTGKVLRGAPWQIVIFSLGMYLV+YGLRNAG
Sbjct: 6763 LEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAG 6942
Query: 301 LTDYLSDVLNELADKXXXXXXXXXXXXXXXXSSIMNNMPTVLIGALSIDGSTATGVIKEA 360
LT+YLS VLN LAD SSIMNNMPTVL+GALSIDGSTA+GVIKEA
Sbjct: 6943 LTEYLSGVLNVLADNGLWAATLGTGFLTAFLSSIMNNMPTVLVGALSIDGSTASGVIKEA 7122
Query: 361 MIYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTITWGYYFRTGIVMTLPVLFVTLAA 420
M+YANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTI+WGYYFRTGI+MTLPVLFVTLAA
Sbjct: 7123 MVYANVIGCDLGPKITPIGSLATLLWLHVLSQKNMTISWGYYFRTGIIMTLPVLFVTLAA 7302
Query: 421 LALRLSVTL 429
LALRLS TL
Sbjct: 7303 LALRLSFTL 7329
|
ArsC
>gi|17530571:49266-49691 IncN plasmid R46, complete sequence
ATGAGCAACATCACCATTTATCACAACCCACACTGCGGCACGTCGCGTAATACGCTGGAGATGATCCGCA
ACAGCGGTATCGAGCCGACCGTTATTCTTTACCTTGAGACTCCACCTTCACGCGATGAGCTGCTCAAACT
CATTGCGGATATGGGCATTTCCGTCCGGGCTTTGCTGCGTAAGAACGTCGAGCCGTATGAGGAACTGGGT
CTTGCAGAAGATAAATTTACTGACGACCAGCTCATCGACTTTATGCTACAGCATCCGATTCTGATCAACC
GTCCGATCGTAGTGACGCCACTGGGAACTAAACTTTGCCGTCCTTCAGAGGTTGTTCTCGATATCCTTCC
AGATGCCCAGAAAGCGGCTTTCACCAAGGAAGACGGTGAAAAAGTCGTTGATGATTCAGGTAAAAGACTG
AAATAA
|
>Ecoli20030128.Contig618.fa
Length = 9618
Score = 278 bits (140), Expect = 4e-75
Identities = 338/404 (83%)
Strand = Plus / Plus
Query: 1 atgagcaacatcaccatttatcacaacccacactgcggcacgtcgcgtaatacgctggag 60
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 7345 atgagcaacattaccatttatcacaacccggcctgcggcacgtcgcgtaatacgctggag 7404
Query: 61 atgatccgcaacagcggtatcgagccgaccgttattctttaccttgagactccaccttca 120
||||||||||||||||| | || ||||| |||| | ||| || || ||||| || |
Sbjct: 7405 atgatccgcaacagcggcacagaaccgactattatccattatctggaaactccgccaacg 7464
Query: 121 cgcgatgagctgctcaaactcattgcggatatgggcatttccgtccgggctttgctgcgt 180
|||||||| ||| ||||||||||||| |||||||| |||||||| || || ||||||||
Sbjct: 7465 cgcgatgaactggtcaaactcattgccgatatggggatttccgtacgcgcgctgctgcgt 7524
Query: 181 aagaacgtcgagccgtatgaggaactgggtcttgcagaagataaatttactgacgaccag 240
|| |||||||| ||||||||||| ||||| ||||| |||||||||||||||||||| | |
Sbjct: 7525 aaaaacgtcgaaccgtatgaggagctgggccttgcggaagataaatttactgacgatcgg 7584
Query: 241 ctcatcgactttatgctacagcatccgattctgatcaaccgtccgatcgtagtgacgcca 300
| |||||||||||||| ||||| ||||||||||| || || ||||| || ||||||||
Sbjct: 7585 ttaatcgactttatgcttcagcacccgattctgattaatcgcccgattgtggtgacgccg 7644
Query: 301 ctgggaactaaactttgccgtccttcagaggttgttctcgatatccttccagatgcccag 360
||||||||| || ||||| |||||||| || || || || || || |||||||| ||
Sbjct: 7645 ctgggaactcgcctgtgccgcccttcagaagtggtgctggaaattctgccagatgcgcaa 7704
Query: 361 aaagcggctttcaccaaggaagacggtgaaaaagtcgttgatga 404
|||| || ||| |||||||||| || || ||||| ||||||||
Sbjct: 7705 aaaggcgcattctccaaggaagatggcgagaaagtggttgatga 7748
|
>gi|151856:3286-3711 Plasmid R773 arsenical resistance operon genes, arsA, arsB and arsC, complete cds
ATGAGCAACATCACTATTTATCATAACCCAGCCTGCGGCACCTCGCGTAATACGCTGGAGATGATCCGCA
ACAGCGGTACCGAGCCGACCATTATTCTTTACCTTGAAAACCCGCCTTCGAGGGATGAGCTGGTTAAACT
TATTGCCGATATGGGTATTTCAGTACGAGCGCTGCTGCGTAAAAACGTTGAACCTTACGAGCAACTGGGT
CTTGCAGAAGATAAATTTACTGACGATCAGCTCATCGACTTTATGTTGCAACACCCAATTCTGATTAACC
GTCCGATCGTGGTTACGCCGCTGGGAACCAGACTGTGCCGTCCTTCTGAAGTGGTTCTGGATATCCTACA
GGATGCGCAGAAAGGGGCTTTCACTAAGGAAGACGGTGAAAAAGTCGTTGATGAAGCAGGAAAACGGCTG
AAATAA
|
>Ecoli20030128.Contig618.fa
Length = 9618
Score = 313 bits (158), Expect = 8e-86
Identities = 359/426 (84%)
Strand = Plus / Plus
Query: 1 atgagcaacatcactatttatcataacccagcctgcggcacctcgcgtaatacgctggag 60
||||||||||| || |||||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 7345 atgagcaacattaccatttatcacaacccggcctgcggcacgtcgcgtaatacgctggag 7404
Query: 61 atgatccgcaacagcggtaccgagccgaccattattctttaccttgaaaacccgccttcg 120
||||||||||||||||| || || ||||| ||||| | ||| || |||| ||||| ||
Sbjct: 7405 atgatccgcaacagcggcacagaaccgactattatccattatctggaaactccgccaacg 7464
Query: 121 agggatgagctggttaaacttattgccgatatgggtatttcagtacgagcgctgctgcgt 180
| ||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 7465 cgcgatgaactggtcaaactcattgccgatatggggatttccgtacgcgcgctgctgcgt 7524
Query: 181 aaaaacgttgaaccttacgagcaactgggtcttgcagaagataaatttactgacgatcag 240
|||||||| ||||| || ||| | ||||| ||||| |||||||||||||||||||||| |
Sbjct: 7525 aaaaacgtcgaaccgtatgaggagctgggccttgcggaagataaatttactgacgatcgg 7584
Query: 241 ctcatcgactttatgttgcaacacccaattctgattaaccgtccgatcgtggttacgccg 300
| |||||||||||| | || ||||| ||||||||||| || ||||| ||||| ||||||
Sbjct: 7585 ttaatcgactttatgcttcagcacccgattctgattaatcgcccgattgtggtgacgccg 7644
Query: 301 ctgggaaccagactgtgccgtccttctgaagtggttctggatatcctacaggatgcgcag 360
|||||||| | |||||||| ||||| |||||||| ||||| || || | ||||||||
Sbjct: 7645 ctgggaactcgcctgtgccgcccttcagaagtggtgctggaaattctgccagatgcgcaa 7704
Query: 361 aaaggggctttcactaaggaagacggtgaaaaagtcgttgatgaagcaggaaaacggctg 420
||||| || ||| | |||||||| || || ||||| ||||||||||| || || || |||
Sbjct: 7705 aaaggcgcattctccaaggaagatggcgagaaagtggttgatgaagcgggtaagcgcctg 7764
Query: 421 aaataa 426
||||||
Sbjct: 7765 aaataa 7770
|
ArsD
>gi|17530571:45783-46145 IncN plasmid R46, complete sequence
ATGAAAATGTTAACGGTGTTTGATCCGGCGATGTGCTGCAGTACCGGCGTTTGTGGTTCAGATGTCGATC
AGGTTTTGGTCAATTTTTCTGCTGATGTGCAATGGCTGAAAGGGCGTGGGGTTCAGATCGAACGTTATAA
CCTGGCGCACGAGCCTATGAGCTTCGTTGAGAACGAAAAAGCGAAAGCATTCCTTGAGGCTTCTGGAGCT
GAAGGGCTTCCGCTGCTGTTGCTTGATGGTGAAACGGTGATGGCCGGGCGATACCCAAAACGCGCTGAAC
TGGCTCGCTGGTTTGGTATACCGCTGGAAAAGGTGGGTTTAGCTTCCACCAGTTGCTGTGGTGGTAAAAC
TTCCTGTTGTTGA
|
>Ecoli20030128.Contig445.fa
Length = 22106
Score = 32.2 bits (16), Expect = 0.35
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 50 tttgtggttcagatgt 65
||||||||||||||||
Sbjct: 6396 tttgtggttcagatgt 6411
|
ArsR
>gi|17530571:45382-45735 IncN plasmid R46, complete sequence
ATGCCAGAAATTGCATCCCTACAACTTTTCAAAATACTATCTGATGAAACCCGCCTGGGTATCGTGCTAC
TGCTCAGGGAGATGGGGGAGCTGTGCGTATGCGATCTCTGCACAGCGCTGGAACAATCACAACCCAAGAC
CTCCCGCCATCTGGCGATGCTTCGGGAAAGTGGCCTGTTGCTGGATCGCAAGCAGGGGAAATGGGTTCAT
TATCGCTTATCCCCGCATATTCCTTCCTGGGCTGCCCTGGTGATTGAGCAGGCCTGGTTAAGTCAACAGG
ACGACGTACAGGCCATCGCCCGTAAGCTGGCATCGGCCAACTGCTCTGGCAGCGGTAAGGCTGTTTGTAT
CTAA
|
>Ecoli20030128.Contig618.fa
Length = 9618
Score = 117 bits (59), Expect = 7e-27
Identities = 171/207 (82%), Gaps = 1/207 (0%)
Strand = Plus / Plus
Query: 28 ttcaaaatactatctgatgaaacccgcctgggtatcgtgctactgctcagggagatgggg 87
|||||||| || ||||||||||||| ||||| ||||| |||||||||| || ||||
Sbjct: 5662 ttcaaaattcttgctgatgaaacccgtctgggcatcgttttactgctcagcgaactggga 5721
Query: 88 gagctgtgcgtatgcgatctctgcacagcgctggaacaatcacaacccaagacctcccgc 147
||| | ||||| |||||||||||||| || || || || || || ||||||| |||||||
Sbjct: 5722 gagttatgcgtctgcgatctctgcactgctctcgaccagtcgcagcccaagatctcccgc 5781
Query: 148 catctggcgatgcttcgggaaagtggcctgttgctggatcgcaagcaggggaaa-tgggt 206
|| ||||| |||| || ||||| || || |||||||| |||||||| || ||| |||||
Sbjct: 5782 cacctggcattgctgcgtgaaagcgggctattgctggaccgcaagcaaggtaaagtgggt 5841
Query: 207 tcattatcgcttatccccgcatattcc 233
|||||| |||||||| |||||||||||
Sbjct: 5842 tcattaccgcttatcaccgcatattcc 5868
|
>gi|17530578|ref|NP_511236.1| DNA-binding transcriptional repressor ArsR [IncN plasmid R46]
MPEIASLQLFKILSDETRLGIVLLLREMGELCVCDLCTALEQSQPKTSRHLAMLRESGLLLDRKQGKWVH
YRLSPHIPSWAALVIEQAWLSQQDDVQAIARKLASANCSGSGKAVCI
|
>Ecoli20030128.Contig618.fa
Length = 9618
Score = 112 bits (280), Expect(2) = 9e-44
Identities = 55/67 (82%), Positives = 61/67 (91%)
Frame = +1
Query: 1 MPEIASLQLFKILSDETRLGIVLLLREMGELCVCDLCTALEQSQPKTSRHLAMLRESGLL 60
M + +QLFKIL+DETRLGIVLLL E+GELCVCDLCTAL+QSQPK SRHLA+LRESGLL
Sbjct: 5635 MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQPKISRHLALLRESGLL 5814
Query: 61 LDRKQGK 67
LDRKQGK
Sbjct: 5815 LDRKQGK 5835
|
"
