Team:Groningen/Modelling/model/calc.js

From 2009.igem.org

Revision as of 10:11, 26 August 2009 by Annelies (Talk | contribs)

function calc(){ 

 //  gets input
 var growthFactorNode = document.getElementById("growthFactor");

 // reads input
 var growthFactor = Number(growthFactorNode.value); 
 
 // begin variable
 var time = 0;
 var x = 0;
 var y = 0;
 arrValueX = new Array();
 arrValueY = new Array();



 // process
 var growthFactor = growthFactor + 1;
 for (var time = 0; time < 30; time++) {
   var y = growthFactor*x*x;
   var x = x + 1;
   arrValueX.push(x);
   arrValueY.push(y);
 }
 

 // Set outputs
 setOutput(growthFactorAnswer, growthFactor ); 
 document.getElementById('growthFactorGraph').refresh();

}


function setOutput(node,v) { 

 node.innerHTML = formatNumberToHTML(v);
 node.value = v;

}


function formatNumberToHTML(v,p) { 

 if (p===undefined) p = 5;
 return v.toPrecision(p)
         .replace(/e\+([0-9]+)$/i,'·10$1')
         .replace(/e\-([0-9]+)$/i,'·10-$1');

}


// ------ Annelies timer functie ---------

// function tijd(){ // setTimeout( "doSomething()", 3000 ); // }

// function doSomething(){ // if (doSomething.time === undefined) { // doSomething.time = 0; // } // // // Set outputs // setOutput(tijdAnswer, doSomething.time); // doSomething.time += 1; // // if (doSomething.time<=100) setTimeout( "doSomething()", 3000 ); // }



// -------- transport ----------

// var myCars=new Array();

function transport(){ 

// variablen
 var data = {time: [0],
             AsIn: [0],
             ArsB: [5],
             AsEx: [5],
             GlpF: [5],
             GlpFAs: [0],
             ArsBAs: [0]};

// constanten 

 var totalTime = 300;
 var stepSize = 3;
 var K5on = 1;
 var K5off =2;
 var K6 = 3;
 var Vc = 4;
 var Vs = 5;
 var K7on = 6;
 var K7off = 7;
 var K8 = 8;



 var N = totalTime / stepSize ;

 for (var i=1;i<=N;i++){
   data.GlpFAs[i] = data.GlpFAs[i-1] + stepSize * (K5on * data.AsEx[i-1] * data.GlpF[i-1] - (K5off + K6) * data.GlpFAs[i-1]);
   data.AsEx[i] = data.AsEx[i-1] + stepSize * (-K5on * data.AsEx[i-1] * data.GlpF[i-1] + K5off * data.GlpFAs[i-1] + (Vc/Vs) * K8 * data.ArsBAs[i-1]);
   data.GlpF[i] = data.GlpF[i-1] + stepSize * (-(K5on * data.AsEx[i-1] * data.GlpF[i-1] - (K5off + K6) * data.GlpFAs[i-1]));
   data.ArsBAs[i] = data.ArsBAs[i-1] + stepSize * (K7on * data.AsIn[i-1] * data.ArsB[i-1] - (K7off+K8) * data.ArsBAs[i-1]);
   data.AsIn[i] = data.AsIn[i-1] + stepSize * (-K7on * data.AsIn[i-1] * data.ArsB[i-1] - (K7off + K8) * data.ArsBAs[i-1] - K8 * data.ArsBAs[i-1] + (Vs/Vc) * K6 * data.GlpFAs[i-1]);
   data.ArsB[i] = data.ArsB[i-1] + stepSize * (-(K7on * data.AsIn[i-1] * data.ArsB[i-1] - (K7off + K8) * data.ArsBAs[i-1]));
   data.time[i] = data.time[i-1] + stepSize;
 }

 //setOutput(ModelAnswer, AsIn[3]); 
 var modelDataNode = document.getElementById("modelData");
 modelDataNode.data = data;

 document.getElementById("growthFactorGraph").refresh();

}

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