Team:Newcastle/SBML

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Contents

SBML

SBML.png
Copasi.png

SBML is a language which stores and exchanges computer-based mathematical models. It is an open standard based on the XML markup language. For writing the models in SBML we used the COPASI program.

JSim

To bridge the gap between agent based models (Java) and cellular models (SBML), the Newcastle team are using a software product called JSim, developed by the University of Washington.

Models developed

The following are models which we have developed using SBML:

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