Team:UNIPV-Pavia/Project/References

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[1] http://www.qiagen.com/.
 
-
[2] http://www.openwetware.org/wiki/e. coli genotypes, 2008.
+
[1] <html><a href="http://openwetware.org/wiki/E._coli_genotypes" target="_blank">http://openwetware.org/wiki/E._coli_genotypes</a></html>
-
[3] http://www.invitrogen.com, 2009.
+
[2] AINT. Tecnologie disponibili per il trattamento di siero di latte e reflui
-
 
+
-
[4] AINT. Tecnologie disponibili per il trattamento di siero di latte e reflui
+
dell'industria lattiero-casearia e localizzazione degli impianti in Puglia.
dell'industria lattiero-casearia e localizzazione degli impianti in Puglia.
Technical report, Agenzia per l'innovazione e l'internazionalizzazione delle
Technical report, Agenzia per l'innovazione e l'internazionalizzazione delle
imprese, 2007.
imprese, 2007.
-
[5] L. Banchelli. Recupero dei costituenti organici del siero del latte e bioconversione
+
[3] L. Banchelli. Recupero dei costituenti organici del siero del latte e bioconversione
in proteine unicellulari da lievito alimentare. Technical report,
in proteine unicellulari da lievito alimentare. Technical report,
OGM - Food Biopollution certification, 2002.
OGM - Food Biopollution certification, 2002.
-
[6] S. Bansal, H.S. Oberoi, G.S.Dhillon, and R.T: pAtil. Production of betagalactosidase
+
[4] S. Bansal, H.S. Oberoi, G.S.Dhillon, and R.T: pAtil. Production of betagalactosidase
by Kluyveromyces marxianus MTCC 1388 using whey and
by Kluyveromyces marxianus MTCC 1388 using whey and
effect of four different methods of enzyme extraction on betagalactosidase
effect of four different methods of enzyme extraction on betagalactosidase
activity. Indian J. Microbial, September 2008.
activity. Indian J. Microbial, September 2008.
-
[7] C. Bi, X. Zhang, L.O. Ingram, and J.F. Preston. Genetic engineering
+
[5] C. Bi, X. Zhang, L.O. Ingram, and J.F. Preston. Genetic engineering
of Enterobacter absuriae strain JDR-1 for efficient production of ethanol
of Enterobacter absuriae strain JDR-1 for efficient production of ethanol
from hemicellulose hydrolysate. Applied and enviromental microbiology,
from hemicellulose hydrolysate. Applied and enviromental microbiology,
75(18):5743-5749, September 2009.
75(18):5743-5749, September 2009.
-
[8] BioVision. Ethanol assay kit.
+
[6] E. Brunelli. Nuove idee per nuove specie batteriche. Industria della carta,
-
 
+
-
[9] E. Brunelli. Nuove idee per nuove specie batteriche. Industria della carta,
+
2008.
2008.
-
[10] B. Canton. http://partsregistry.org/Part:BBa f2620, 2008.
+
[7] Barry Canton, Anna Labno, and Drew Endy. Refinement and standardization
-
 
+
-
[11] Barry Canton, Anna Labno, and Drew Endy. Refinement and standardization
+
of synthetic biological parts and devices. Nature biotechnology,
of synthetic biological parts and devices. Nature biotechnology,
26(7):787-793, 2008.
26(7):787-793, 2008.
-
[12] Bartholomew Canton. Engineering the interface between cellular chassis
+
[8] Bartholomew Canton. Engineering the interface between cellular chassis
and synthetic biological systems. PhD thesis, Massachussets Institute of
and synthetic biological systems. PhD thesis, Massachussets Institute of
Technology, May 2008.
Technology, May 2008.
-
[13] T. Conway, A. Osman, J.I.Konnan, E.M.Hoffman, and L.O.Ingram.
+
[9] T. Conway, A. Osman, J.I.Konnan, E.M.Hoffman, and L.O.Ingram.
Promoter and nucleotide sequence of the Zymomonas mobilis Pyruvate
Promoter and nucleotide sequence of the Zymomonas mobilis Pyruvate
Decarboxylase. Journal of Bacteriology, 169(3):949-954, March 1987.
Decarboxylase. Journal of Bacteriology, 169(3):949-954, March 1987.
-
[14] G. Croce. Tipologie di recupero tradizionale del siero. Technical report,
+
[10] G. Croce. Tipologie di recupero tradizionale del siero. Technical report,
ERVET Emilia-Romagna Valorizzazione Economica Territorio SpA, 2002.
ERVET Emilia-Romagna Valorizzazione Economica Territorio SpA, 2002.
-
[15] Programma di Iniziativa Comunitaria Interreg III A Grecia-Italia 2000-
+
[11] Programma di Iniziativa Comunitaria Interreg III A Grecia-Italia 2000-
2006. Trattamento e valorizzazione reflui dell'industria lattiero-casearia,
2006. Trattamento e valorizzazione reflui dell'industria lattiero-casearia,
2006.
2006.
-
[16] V. Divella and G. Mastrini. SieroValore: scenari e prospettive per la
+
[12] V. Divella and G. Mastrini. SieroValore: scenari e prospettive per la
valorizzazione dei reflui caseari. Technical report, Programma di Iniziativa
valorizzazione dei reflui caseari. Technical report, Programma di Iniziativa
Comunitaria Interreg III A Grecia-Italia 2000-2006, Assessorato Attivit`a
Comunitaria Interreg III A Grecia-Italia 2000-2006, Assessorato Attivit`a
Produttive della Provincia di Bari, 2008.
Produttive della Provincia di Bari, 2008.
-
[17] M.D. Ermolaeva. Synonymous codon usage in bacteria. Current Issues of
+
[13] M.D. Ermolaeva. Synonymous codon usage in bacteria. Current Issues of
Molecular Biology, 3(4):91-97, 2001.
Molecular Biology, 3(4):91-97, 2001.
-
[18] E. Del Fabbro. Sviluppo di applicativi Matlab e definizione di metodologie
+
[14] Hyun-Beom Seo, Hyun-Joo Kim, Oh-Kyu Lee, Ji-Hye Ha, Hyeon-Yong Lee and Kyung-Hwan Jung. Measurement of ethanol concentration using solvent extraction and dichromate oxidation and its application to bioethanol production process. J Ind Microbiol Biotechnol (2009) 36:285–292.
-
per l'analisi quantitativa di dati in biologia sintetica., 2009 Universit`a degli
+
-
studi di Pavia.
+
-
[19] M. Faccia. Studio sull'entità e sulla tipologia dei reflui prodotti dall'industria
+
[15] M. Faccia. Studio sull'entità e sulla tipologia dei reflui prodotti dall'industria
lattiero-casearia in provincia di Bari. Technical report, Universit`a
lattiero-casearia in provincia di Bari. Technical report, Universit`a
degli Studi di Bari - Dipartimento di progettazione e gestione dei sistemi
degli Studi di Bari - Dipartimento di progettazione e gestione dei sistemi
agrozootecnici e forestali, 2008.
agrozootecnici e forestali, 2008.
-
[20] R. Gelleti, R. Jodice, G. Mauro, D. Migliardi, D. Picco, M. Pin, E. Tomasinsig,
+
[16] R. Gelleti, R. Jodice, G. Mauro, D. Migliardi, D. Picco, M. Pin, E. Tomasinsig,
and L. Tommasoni. Energia dalle biomasse: le tecnologie, i
and L. Tommasoni. Energia dalle biomasse: le tecnologie, i
vantaggi per i processi produttivi, i valori economici e ambientali. Technical
vantaggi per i processi produttivi, i valori economici e ambientali. Technical
Line 101: Line 90:
Progetto Novimpresa, April 2006.
Progetto Novimpresa, April 2006.
-
[21] B. Hahn-Hagerdal, M. Galbe, M.F. Gorwa-Grauslund, G. Liden, and
+
[16] B. Hahn-Hagerdal, M. Galbe, M.F. Gorwa-Grauslund, G. Liden, and
G.Zacchi. Bioethanol, the fuel of tomorrow from the residues of today.
G.Zacchi. Bioethanol, the fuel of tomorrow from the residues of today.
TRENDS in biotechnology, 24(12):549-555, 2006.
TRENDS in biotechnology, 24(12):549-555, 2006.
-
[22] iGEM. https://2009.igem.org/team:UNIPV-pavia/Freezer, 2009.
+
[17] L. 0. Ingram, T. Conway, G. W. Sewell D. P. Clark, and J. F. Preston.
-
 
+
-
[23] iGEM. http://partsregistry.org/, 2009.
+
-
 
+
-
[24] iGEM. http://partsregistry.org/Catalog, 2009.
+
-
 
+
-
[25] iGEM. http://partsregistry.org/help:IGEM 09 DNA distribution, 2009.
+
-
 
+
-
[26] L. 0. Ingram, T. Conway, G. W. Sewell D. P. Clark, and J. F. Preston.
+
Genetic engineering of ethanol production in Escherichia coli. Applied and
Genetic engineering of ethanol production in Escherichia coli. Applied and
enviromental microbiology, 53(10):2420-2425, october 1987.
enviromental microbiology, 53(10):2420-2425, october 1987.
-
[27] J.R. Kelly, A.J. Rubin, J.H.Davis, C.M. Ajo-Franklin, J.Cumbers,
+
<html><a name="18" id="18"></a></html>
 +
[18] J.R. Kelly, A.J. Rubin, J.H.Davis, C.M. Ajo-Franklin, J.Cumbers,
M.J.Czar, K. de Mora, A.L. Glieberman, D.D. Moonie, and D. Endy.
M.J.Czar, K. de Mora, A.L. Glieberman, D.D. Moonie, and D. Endy.
Measuring the activity of BioBrick promoters using an in vivo reference
Measuring the activity of BioBrick promoters using an in vivo reference
standard. Journal of Biological Engineering, 3, 2009.
standard. Journal of Biological Engineering, 3, 2009.
-
[28] J.F. Lawrence and H. Ochman. Amelioration of bacterial genome: rates of
+
[19] J.F. Lawrence and H. Ochman. Amelioration of bacterial genome: rates of
change and exchange. Journal of Molecular Evolution, 44:383-397, 1997.
change and exchange. Journal of Molecular Evolution, 44:383-397, 1997.
-
[29] K.C. Ling. Whey to ethanol: a biofuel role for diary cooperatives?
+
[20] K.C. Ling. Whey to ethanol: a biofuel role for diary cooperatives?
Technical report, USDA Rural developement, February 2008.
Technical report, USDA Rural developement, February 2008.
-
[30] B.W. Matthews. The structure of E. coli beta-galactosidase.
+
[21] B.W. Matthews. The structure of E. coli beta-galactosidase.
C.R.Biologies, 328:549-556, 2005.
C.R.Biologies, 328:549-556, 2005.
-
[31] Comunit`a montana di Baldo. L'energia da biomasse. Technical report,
+
[22] Comunità montana di Baldo. L'energia da biomasse. Technical report,
-
Comunit`a montana di Baldo, 2007.
+
Comunità montana di Baldo, 2007.
-
[32] Hyun-Beom Seo, Hyun-Joo Kim, Oh-Kyu Lee, Ji-Hye ha, Hyeon-Yong
+
[23] Hyun-Beom Seo, Hyun-Joo Kim, Oh-Kyu Lee, Ji-Hye ha, Hyeon-Yong
Lee, and Kyung-Hwan Jung. Measurement of ethanol concentration
Lee, and Kyung-Hwan Jung. Measurement of ethanol concentration
using solvent extraction and dichromate oxidation and its application to
using solvent extraction and dichromate oxidation and its application to
Line 140: Line 122:
biotechonology, 36:285-292, 2009.
biotechonology, 36:285-292, 2009.
-
[33] W.B. Silviera, F.J.V. Passos, H.C. Mantovani, and F.M.L. Passos. Ethanol
+
[24] W.B. Silviera, F.J.V. Passos, H.C. Mantovani, and F.M.L. Passos. Ethanol
production from cheese whey permeate by Kluyveromyces marxianus
production from cheese whey permeate by Kluyveromyces marxianus
UFV3: a flux analysis of oxido reductive metabolism as a function of lactose
UFV3: a flux analysis of oxido reductive metabolism as a function of lactose
Line 146: Line 128:
36:930-936, 2005.
36:930-936, 2005.
-
[34] TECAN. TECAN - instruction for use In nte 200. TECAN, 2008.
+
[25] P. Wix and M. Woodbine. The disposal and utilization of whey: a review.
-
 
+
-
[35] P. Wix and M. Woodbine. The disposal and utilization of whey: a review.
+
Dairy Science, 20:537-541, 1958.
Dairy Science, 20:537-541, 1958.
-
[36] L.P. Yomano, S.W. York, S. Zhou, K.T. Shanmugam, and L.O. Ingram.
+
[26] L.P. Yomano, S.W. York, S. Zhou, K.T. Shanmugam, and L.O. Ingram.
Re-engineereing Escherichia coli for ethanol produztion. Biotechnology
Re-engineereing Escherichia coli for ethanol produztion. Biotechnology
letters, 30:2097-2113, 2008.
letters, 30:2097-2113, 2008.
-
[37] S.W. York and L-O-Ingram. Soy-based medium for ethanol production
+
[27] S.W. York and L-O-Ingram. Soy-based medium for ethanol production
by Escherichia coli K011. Journal of industrial microbiology and
by Escherichia coli K011. Journal of industrial microbiology and
biotechonology, 16(6):374-376, 1996
biotechonology, 16(6):374-376, 1996
-
[38] Altherthum F, Ingram LO. Efficient ethanol production from glucose, lactose, and xylose by Recombinant E. coli. Appl Environ Microbiol. 1989 Aug;1943-1984.
+
[28] Altherthum F, Ingram LO. Efficient ethanol production from glucose, lactose, and xylose by Recombinant E. coli. Appl Environ Microbiol. 1989 Aug;1943-1984.
   
   
-
[39] Bansal S, Oberoi HS, Dhillon GS, Patil RT. Production of β-galactosidase by Kluyveromyces marxianus MTCC 1388 using whey and effect of four different methods of enzyme extraction on β-galactosidase activity. Indian J Microbiol. 2008 Sept;48(3):337-341.   
+
[29] Bansal S, Oberoi HS, Dhillon GS, Patil RT. Production of β-galactosidase by Kluyveromyces marxianus MTCC 1388 using whey and effect of four different methods of enzyme extraction on β-galactosidase activity. Indian J Microbiol. 2008 Sept;48(3):337-341.   
   
   
-
[40] Dien BS, Cotta MA, Jeffries TW. Bacteria engineered for fuel ethanol production: current status. Applied microbiology and biotechnology. 2003 Dec;63(3):258-266.
+
[30] Dien BS, Cotta MA, Jeffries TW. Bacteria engineered for fuel ethanol production: current status. Applied microbiology and biotechnology. 2003 Dec;63(3):258-266.
   
   
-
[41] Dien BS, Nichols NN, O'Bryan PJ and Bothast PJ..Development of new ethanologenic Escherichia coli strains for fermentation of lignocellulosic biomass. Applied Biochemistry and Biotechnology. 2000 Mar;84-86(1-9):181-196.
+
[31] Dien BS, Nichols NN, O'Bryan PJ and Bothast PJ..Development of new ethanologenic Escherichia coli strains for fermentation of lignocellulosic biomass. Applied Biochemistry and Biotechnology. 2000 Mar;84-86(1-9):181-196.
   
   
-
[42] Domingues L, Lima N, Teixeira JA. Alcohol production from cheese whey permeate using genetically modified flocculent yeast cells. Biotechnol Bioeng. 2001 Mar 5;72(5):507-514.
+
[32] Domingues L, Lima N, Teixeira JA. Alcohol production from cheese whey permeate using genetically modified flocculent yeast cells. Biotechnol Bioeng. 2001 Mar 5;72(5):507-514.
   
   
-
[43] Frey PA.The Leloir pathway: a mechanistic imperative for three enzymes to change the stereochemical configuration of a single carbon in galactose. FASEB J. 1996 Mar;10(4):461-470.
+
[33] Frey PA.The Leloir pathway: a mechanistic imperative for three enzymes to change the stereochemical configuration of a single carbon in galactose. FASEB J. 1996 Mar;10(4):461-470.
   
   
-
[44] Guimarães PM, Klein J, Domingues L, Teixeira JA. Fermentation performance of a recombinant lactose-consuming flocculating Saccharomyces cerevisiae stain. Braz J Food Technol. 2005 Mar;5°SIPAL:34-39.
+
[34] Guimarães PM, Klein J, Domingues L, Teixeira JA. Fermentation performance of a recombinant lactose-consuming flocculating Saccharomyces cerevisiae stain. Braz J Food Technol. 2005 Mar;5°SIPAL:34-39.
   
   
-
[45] Guimarães PM, Teixeira JA, Domingues L. Fermentation of high concentrations of lactose to ethanol by engineered flocculent Saccharomyces cerevisiae. Biotechnol Lett. 2008 Nov;30(11):1953-8. Epub 2008 Jun 25.
+
[35] Guimarães PM, Teixeira JA, Domingues L. Fermentation of high concentrations of lactose to ethanol by engineered flocculent Saccharomyces cerevisiae. Biotechnol Lett. 2008 Nov;30(11):1953-8. Epub 2008 Jun 25.
   
   
-
[46] Guimarães PM, Teixeira JA, Domingues L. Alcoholic fermentation of lactose by engineered flocculent Saccharomyces cerevisiae. International conference and exhibition on bioenergy, Guimarães, Portugal, 2008 – “Bioenergy : challenges and opportunities.”
+
[36] Guimarães PM, Teixeira JA, Domingues L. Alcoholic fermentation of lactose by engineered flocculent Saccharomyces cerevisiae. International conference and exhibition on bioenergy, Guimarães, Portugal, 2008 – “Bioenergy : challenges and opportunities.”
-
[47] Holden HM, Rayment I, Thoden JB. Structure and function of enzymes of the Leloir pathway for galactose metabolism. J Biol Chem. 2003 Nov 7;278(45):43885-8. Epub 2003 Aug 15.
+
 
-
[48] Ingram LO, Conway T, Clark DP, Sewell GW, Preston JF. Genetic engineering of ethanol production in Escherichia coli. Appl Environ Microbiol. 1987 Oct;53(10):2420-2425.  
+
[37] Holden HM, Rayment I, Thoden JB. Structure and function of enzymes of the Leloir pathway for galactose metabolism. J Biol Chem. 2003 Nov 7;278(45):43885-8. Epub 2003 Aug 15.
 +
 
 +
[38] Ingram LO, Conway T, Clark DP, Sewell GW, Preston JF. Genetic engineering of ethanol production in Escherichia coli. Appl Environ Microbiol. 1987 Oct;53(10):2420-2425.  
   
   
-
[49] Kalscheuer R, Stölting T, Steinbüchel A. Microdiesel: Escherichia coli engineered for fuel production. Microbiology. 2006 Sep;152(Pt 9):2529-2536.
+
[39] Kalscheuer R, Stölting T, Steinbüchel A. Microdiesel: Escherichia coli engineered for fuel production. Microbiology. 2006 Sep;152(Pt 9):2529-2536.
   
   
-
[50] Leite AR, Guimaraes WV, Fernardes de Araujo E, Silva DO. Fermentation of sweet whey by recombinant Escherichia coli. Braz J Food Technol. 2000;31:212-215.
+
[40] Leite AR, Guimaraes WV, Fernardes de Araujo E, Silva DO. Fermentation of sweet whey by recombinant Escherichia coli. Braz J Food Technol. 2000;31:212-215.
   
   
-
[51] Lewandowska M and Kujawski W. Ethanol production from lactose in a fermentation/pervaporation system. J Food Eng. 2007 Mar;79(2):430-437.
+
[41] Lewandowska M and Kujawski W. Ethanol production from lactose in a fermentation/pervaporation system. J Food Eng. 2007 Mar;79(2):430-437.
   
   
-
[52] Ling KC. Whey to ethanol a biofuel role for dairy cooperatives. USDA Rural Development. Research Report 214. 2008 Feb.
+
[42] Ling KC. Whey to ethanol a biofuel role for dairy cooperatives. USDA Rural Development. Research Report 214. 2008 Feb.
   
   
-
[53] Ostojic S, Pavlovic M, Zivic M, Filipovic Z, Gorjanovi S, Hranisavljevi S and Dojinovic M. Processing of whey from dairy industry waste. Environ Chem Lett. 2005 Aug;3(1):29-32.  
+
[43] Ostojic S, Pavlovic M, Zivic M, Filipovic Z, Gorjanovi S, Hranisavljevi S and Dojinovic M. Processing of whey from dairy industry waste. Environ Chem Lett. 2005 Aug;3(1):29-32.  
   
   
-
[54] Savage DF, Way J, Silver PA. Defossing fuel: how synthetic biology can transform biofuel production. ACS Chem Bio. 2008 Jan;3(1):13-16.
+
[44] Savage DF, Way J, Silver PA. Defossing fuel: how synthetic biology can transform biofuel production. ACS Chem Bio. 2008 Jan;3(1):13-16.
   
   
-
[55] Silveira WB, Passos FJV, Mantovani HC and Passos FML. Ethanol production from cheese whey permeate by Kluyveromyces marxianus UFV-3: A flux analysis of oxido-reductive metabolism as a function of lactose concentration and oxygen levels. Enzym Microb Tech. 2005 May;36(7):930-936.
+
[45] Silveira WB, Passos FJV, Mantovani HC and Passos FML. Ethanol production from cheese whey permeate by Kluyveromyces marxianus UFV-3: A flux analysis of oxido-reductive metabolism as a function of lactose concentration and oxygen levels. Enzym Microb Tech. 2005 May;36(7):930-936.
   
   
-
[56] Staniszewski M, Kujawski W and Lewandowska M. Ethanol production from whey in bioreactor with co-immobilized enzyme and yeast cells followed by pervaporative recovery of product – Kinetic model predictions. J Food Eng. 2007 Oct; 82(4):618-625.  
+
[46] Staniszewski M, Kujawski W and Lewandowska M. Ethanol production from whey in bioreactor with co-immobilized enzyme and yeast cells followed by pervaporative recovery of product – Kinetic model predictions. J Food Eng. 2007 Oct; 82(4):618-625.  
   
   
-
[57] Recupero dei costituenti organici del siero di latte e bioconversione in proteine unicellulari da lievito alimentare. Pilot project I/02/B/F/PP-120211
+
[47] Recupero dei costituenti organici del siero di latte e bioconversione in proteine unicellulari da lievito alimentare. Pilot project I/02/B/F/PP-120211
   
   
-
[58] Agenzia per l'innovazione e l'internazionalizzazione delle imprese. Tecnologie disponibili per il trattamento di siero di latte e reflui dell'industria lattiero casearia e localizzazione degli impianti in Puglia.  
+
[48] Agenzia per l'innovazione e l'internazionalizzazione delle imprese. Tecnologie disponibili per il trattamento di siero di latte e reflui dell'industria lattiero casearia e localizzazione degli impianti in Puglia.  
   
   
-
[59] Tipologie di recupero tradizionale del siero (http://www.tecnologiepulite)
+
[49] Tipologie di recupero tradizionale del siero (<html><a href="http://www.tecnologiepulite" target="_blank">http://www.tecnologiepulite</a></html>)
 +
 
 +
<html><a name="50" id="50"></a></html>
 +
[50] Rachel Karpel, Tamar Alon, Gad GlaserS, Shimon Schuldiner, and Etana Padan - Expression of a Sodium Proton Antiporter (NhaA) in Escherichia coli Is Inducedby Na+ and Li+ Ions - The Journal of Biological Chemistry. 1991 Nov; 266(32):21753-21759.
 +
 
 +
[51] Etana Padan and Shimon Schuldiner - Molecular Physiology Of The Na+/H+ Antiporter In Escherichia Coli - J. exp. Biol. 1994,196:443–456.
 +
 
 +
[52] N. Dover, C. F. Higgins, O. Carmel, A. Rimon, E. Pinner, And E. Padan - Na+-Induced Transcription of nhaA, Which Encodes an Na+/H+ Antiporter in Escherichia coli, Is Positively Regulated by nhaR and Affected by hns - Journal Of Bacteriology, 1996 Nov.; 178(22):6508–6517.
 +
 
 +
[53] Nir Dover And Etana Padan - Transcription of nhaA, the Main Na+/H+ Antiporter of Escherichia coli, Is Regulated by Na+ and Growth Phase - Journal Of Bacteriology, 2001 Jan.; 183(2):644–653.
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Latest revision as of 23:01, 21 October 2009

EthanolPVanimation.gif



References

[1] http://openwetware.org/wiki/E._coli_genotypes

[2] AINT. Tecnologie disponibili per il trattamento di siero di latte e reflui dell'industria lattiero-casearia e localizzazione degli impianti in Puglia. Technical report, Agenzia per l'innovazione e l'internazionalizzazione delle imprese, 2007.

[3] L. Banchelli. Recupero dei costituenti organici del siero del latte e bioconversione in proteine unicellulari da lievito alimentare. Technical report, OGM - Food Biopollution certification, 2002.

[4] S. Bansal, H.S. Oberoi, G.S.Dhillon, and R.T: pAtil. Production of betagalactosidase by Kluyveromyces marxianus MTCC 1388 using whey and effect of four different methods of enzyme extraction on betagalactosidase activity. Indian J. Microbial, September 2008.

[5] C. Bi, X. Zhang, L.O. Ingram, and J.F. Preston. Genetic engineering of Enterobacter absuriae strain JDR-1 for efficient production of ethanol from hemicellulose hydrolysate. Applied and enviromental microbiology, 75(18):5743-5749, September 2009.

[6] E. Brunelli. Nuove idee per nuove specie batteriche. Industria della carta, 2008.

[7] Barry Canton, Anna Labno, and Drew Endy. Refinement and standardization of synthetic biological parts and devices. Nature biotechnology, 26(7):787-793, 2008.

[8] Bartholomew Canton. Engineering the interface between cellular chassis and synthetic biological systems. PhD thesis, Massachussets Institute of Technology, May 2008.

[9] T. Conway, A. Osman, J.I.Konnan, E.M.Hoffman, and L.O.Ingram. Promoter and nucleotide sequence of the Zymomonas mobilis Pyruvate Decarboxylase. Journal of Bacteriology, 169(3):949-954, March 1987.

[10] G. Croce. Tipologie di recupero tradizionale del siero. Technical report, ERVET Emilia-Romagna Valorizzazione Economica Territorio SpA, 2002.

[11] Programma di Iniziativa Comunitaria Interreg III A Grecia-Italia 2000- 2006. Trattamento e valorizzazione reflui dell'industria lattiero-casearia, 2006.

[12] V. Divella and G. Mastrini. SieroValore: scenari e prospettive per la valorizzazione dei reflui caseari. Technical report, Programma di Iniziativa Comunitaria Interreg III A Grecia-Italia 2000-2006, Assessorato Attivit`a Produttive della Provincia di Bari, 2008.

[13] M.D. Ermolaeva. Synonymous codon usage in bacteria. Current Issues of Molecular Biology, 3(4):91-97, 2001.

[14] Hyun-Beom Seo, Hyun-Joo Kim, Oh-Kyu Lee, Ji-Hye Ha, Hyeon-Yong Lee and Kyung-Hwan Jung. Measurement of ethanol concentration using solvent extraction and dichromate oxidation and its application to bioethanol production process. J Ind Microbiol Biotechnol (2009) 36:285–292.

[15] M. Faccia. Studio sull'entità e sulla tipologia dei reflui prodotti dall'industria lattiero-casearia in provincia di Bari. Technical report, Universit`a degli Studi di Bari - Dipartimento di progettazione e gestione dei sistemi agrozootecnici e forestali, 2008.

[16] R. Gelleti, R. Jodice, G. Mauro, D. Migliardi, D. Picco, M. Pin, E. Tomasinsig, and L. Tommasoni. Energia dalle biomasse: le tecnologie, i vantaggi per i processi produttivi, i valori economici e ambientali. Technical report, Servizio trasferimento tecnologico di AREA science Park e Progetto Novimpresa, April 2006.

[16] B. Hahn-Hagerdal, M. Galbe, M.F. Gorwa-Grauslund, G. Liden, and G.Zacchi. Bioethanol, the fuel of tomorrow from the residues of today. TRENDS in biotechnology, 24(12):549-555, 2006.

[17] L. 0. Ingram, T. Conway, G. W. Sewell D. P. Clark, and J. F. Preston. Genetic engineering of ethanol production in Escherichia coli. Applied and enviromental microbiology, 53(10):2420-2425, october 1987.

[18] J.R. Kelly, A.J. Rubin, J.H.Davis, C.M. Ajo-Franklin, J.Cumbers, M.J.Czar, K. de Mora, A.L. Glieberman, D.D. Moonie, and D. Endy. Measuring the activity of BioBrick promoters using an in vivo reference standard. Journal of Biological Engineering, 3, 2009.

[19] J.F. Lawrence and H. Ochman. Amelioration of bacterial genome: rates of change and exchange. Journal of Molecular Evolution, 44:383-397, 1997.

[20] K.C. Ling. Whey to ethanol: a biofuel role for diary cooperatives? Technical report, USDA Rural developement, February 2008.

[21] B.W. Matthews. The structure of E. coli beta-galactosidase. C.R.Biologies, 328:549-556, 2005.

[22] Comunità montana di Baldo. L'energia da biomasse. Technical report, Comunità montana di Baldo, 2007.

[23] Hyun-Beom Seo, Hyun-Joo Kim, Oh-Kyu Lee, Ji-Hye ha, Hyeon-Yong Lee, and Kyung-Hwan Jung. Measurement of ethanol concentration using solvent extraction and dichromate oxidation and its application to bioethanol production process. Journal of industrial microbiology and biotechonology, 36:285-292, 2009.

[24] W.B. Silviera, F.J.V. Passos, H.C. Mantovani, and F.M.L. Passos. Ethanol production from cheese whey permeate by Kluyveromyces marxianus UFV3: a flux analysis of oxido reductive metabolism as a function of lactose concentration and oxygen levels. Enzyme and microbial technology, 36:930-936, 2005.

[25] P. Wix and M. Woodbine. The disposal and utilization of whey: a review. Dairy Science, 20:537-541, 1958.

[26] L.P. Yomano, S.W. York, S. Zhou, K.T. Shanmugam, and L.O. Ingram. Re-engineereing Escherichia coli for ethanol produztion. Biotechnology letters, 30:2097-2113, 2008.

[27] S.W. York and L-O-Ingram. Soy-based medium for ethanol production by Escherichia coli K011. Journal of industrial microbiology and biotechonology, 16(6):374-376, 1996

[28] Altherthum F, Ingram LO. Efficient ethanol production from glucose, lactose, and xylose by Recombinant E. coli. Appl Environ Microbiol. 1989 Aug;1943-1984.

[29] Bansal S, Oberoi HS, Dhillon GS, Patil RT. Production of β-galactosidase by Kluyveromyces marxianus MTCC 1388 using whey and effect of four different methods of enzyme extraction on β-galactosidase activity. Indian J Microbiol. 2008 Sept;48(3):337-341.

[30] Dien BS, Cotta MA, Jeffries TW. Bacteria engineered for fuel ethanol production: current status. Applied microbiology and biotechnology. 2003 Dec;63(3):258-266.

[31] Dien BS, Nichols NN, O'Bryan PJ and Bothast PJ..Development of new ethanologenic Escherichia coli strains for fermentation of lignocellulosic biomass. Applied Biochemistry and Biotechnology. 2000 Mar;84-86(1-9):181-196.

[32] Domingues L, Lima N, Teixeira JA. Alcohol production from cheese whey permeate using genetically modified flocculent yeast cells. Biotechnol Bioeng. 2001 Mar 5;72(5):507-514.

[33] Frey PA.The Leloir pathway: a mechanistic imperative for three enzymes to change the stereochemical configuration of a single carbon in galactose. FASEB J. 1996 Mar;10(4):461-470.

[34] Guimarães PM, Klein J, Domingues L, Teixeira JA. Fermentation performance of a recombinant lactose-consuming flocculating Saccharomyces cerevisiae stain. Braz J Food Technol. 2005 Mar;5°SIPAL:34-39.

[35] Guimarães PM, Teixeira JA, Domingues L. Fermentation of high concentrations of lactose to ethanol by engineered flocculent Saccharomyces cerevisiae. Biotechnol Lett. 2008 Nov;30(11):1953-8. Epub 2008 Jun 25.

[36] Guimarães PM, Teixeira JA, Domingues L. Alcoholic fermentation of lactose by engineered flocculent Saccharomyces cerevisiae. International conference and exhibition on bioenergy, Guimarães, Portugal, 2008 – “Bioenergy : challenges and opportunities.”

[37] Holden HM, Rayment I, Thoden JB. Structure and function of enzymes of the Leloir pathway for galactose metabolism. J Biol Chem. 2003 Nov 7;278(45):43885-8. Epub 2003 Aug 15.

[38] Ingram LO, Conway T, Clark DP, Sewell GW, Preston JF. Genetic engineering of ethanol production in Escherichia coli. Appl Environ Microbiol. 1987 Oct;53(10):2420-2425.

[39] Kalscheuer R, Stölting T, Steinbüchel A. Microdiesel: Escherichia coli engineered for fuel production. Microbiology. 2006 Sep;152(Pt 9):2529-2536.

[40] Leite AR, Guimaraes WV, Fernardes de Araujo E, Silva DO. Fermentation of sweet whey by recombinant Escherichia coli. Braz J Food Technol. 2000;31:212-215.

[41] Lewandowska M and Kujawski W. Ethanol production from lactose in a fermentation/pervaporation system. J Food Eng. 2007 Mar;79(2):430-437.

[42] Ling KC. Whey to ethanol a biofuel role for dairy cooperatives. USDA Rural Development. Research Report 214. 2008 Feb.

[43] Ostojic S, Pavlovic M, Zivic M, Filipovic Z, Gorjanovi S, Hranisavljevi S and Dojinovic M. Processing of whey from dairy industry waste. Environ Chem Lett. 2005 Aug;3(1):29-32.

[44] Savage DF, Way J, Silver PA. Defossing fuel: how synthetic biology can transform biofuel production. ACS Chem Bio. 2008 Jan;3(1):13-16.

[45] Silveira WB, Passos FJV, Mantovani HC and Passos FML. Ethanol production from cheese whey permeate by Kluyveromyces marxianus UFV-3: A flux analysis of oxido-reductive metabolism as a function of lactose concentration and oxygen levels. Enzym Microb Tech. 2005 May;36(7):930-936.

[46] Staniszewski M, Kujawski W and Lewandowska M. Ethanol production from whey in bioreactor with co-immobilized enzyme and yeast cells followed by pervaporative recovery of product – Kinetic model predictions. J Food Eng. 2007 Oct; 82(4):618-625.

[47] Recupero dei costituenti organici del siero di latte e bioconversione in proteine unicellulari da lievito alimentare. Pilot project I/02/B/F/PP-120211

[48] Agenzia per l'innovazione e l'internazionalizzazione delle imprese. Tecnologie disponibili per il trattamento di siero di latte e reflui dell'industria lattiero casearia e localizzazione degli impianti in Puglia.

[49] Tipologie di recupero tradizionale del siero (http://www.tecnologiepulite)

[50] Rachel Karpel, Tamar Alon, Gad GlaserS, Shimon Schuldiner, and Etana Padan - Expression of a Sodium Proton Antiporter (NhaA) in Escherichia coli Is Inducedby Na+ and Li+ Ions - The Journal of Biological Chemistry. 1991 Nov; 266(32):21753-21759.

[51] Etana Padan and Shimon Schuldiner - Molecular Physiology Of The Na+/H+ Antiporter In Escherichia Coli - J. exp. Biol. 1994,196:443–456.

[52] N. Dover, C. F. Higgins, O. Carmel, A. Rimon, E. Pinner, And E. Padan - Na+-Induced Transcription of nhaA, Which Encodes an Na+/H+ Antiporter in Escherichia coli, Is Positively Regulated by nhaR and Affected by hns - Journal Of Bacteriology, 1996 Nov.; 178(22):6508–6517.

[53] Nir Dover And Etana Padan - Transcription of nhaA, the Main Na+/H+ Antiporter of Escherichia coli, Is Regulated by Na+ and Growth Phase - Journal Of Bacteriology, 2001 Jan.; 183(2):644–653.