Team:Warsaw/Calendar-Main/22 April 2009

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PCR hly

Kama


Tasks:

  • Amplification of hly

Methods:

  • PCR mixture's composition:

    2,5ul pfu buffer (Fermentas), 2,5ul MgSO4 (Fermentas), 1,5ul primers, 1,5ul dNTPs (10 mM), 0,5ul pfu turbo polymerase (od Antka, ale KNGiE też powinna działać), 1ul template DNA from Listeria, solution was topped up with H2O to 25ul.

    1 repeat of every sample was made (2 different programs).

    Additionally for each sample was made version with 10X dilution of template.

  • PCR programs:
  • hly

    4min 95°C 
    (30s 95°C, 35s 42°C, 1min20s 72°C)x3
    (30s 95°C, 35s 47°C, 1min20s 72°C)x28
    10min 72°C
    ~ 7°C

    random program

  • Electrophoretic separation on 1% agarose gel

Results:

  • Gel (from left)
  1. GeneRuler DNA Ladder Mix #SM0333 (Fermentas)
  2. hly control -
  3. hly
  4. hly (10x diluted template)
  5. hly control -*
  6. hly*
  7. hly (10x diluted template)*

* random program


hly was succesfully amplified (termocykler z gradientem w pokoju 145)