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Team:Imperial College London/M3/Genetic
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=M3 Genetic Circuit= | =M3 Genetic Circuit= | ||
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==Genetic Circuit== | ==Genetic Circuit== | ||
| - | [[Image: | + | [[Image:m3gci.jpg | 700px]] |
==Elaboration== | ==Elaboration== | ||
| - | This is the genetic circuit for | + | This is the genetic circuit for Module 3. Thermally induced genome deletion is kicked off when the temperature is increased to 42°C. |
| - | This construct has two components. The first component controls the production of restriction enzymes DpnII and TaqI. The second component | + | This construct has two main components. The first component controls the production of restriction enzymes DpnII and TaqI. The second component ensures the production of Dam methylase, which protects the DNA. |
| - | Protein production and encapsulation occurs 28°C. In addition, protein | + | Protein production and encapsulation occurs at 28°C. In addition, protein cI857 is produced constitutively at 28°C. It represses the lambda cI promoter, inhibiting restriction enzyme production. The production of Dam methylase protects the E. coli DNA, preventing basal levels of restriction enzyme from causing premature cell death. |
| - | When sufficient protein is being produced and encapsulation is complete, | + | When sufficient protein is being produced and encapsulation is complete, the temperature will be increased to 42°C. This results in the denaturing of the cI857 repressor. This activates the pLambda promoter and restriction enzymes DpnII and TaqI will be produced. Dam methylase will be insufficient to protect the E. coli DNA from being cut and genome deletion would occur. This causes cell death and destruction of possible pathogenicity from E. coli.<br> |
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| + | <html><a href="https://2009.igem.org/Team:Imperial_College_London/M3/Genetic/DpnTaq"><img style="vertical-align:bottom;" width=50px align="left" src="http://i691.photobucket.com/albums/vv271/dk806/II09_Learnmore.png"></a></html> <b><i>About DpnII and TaqI.</i></b> | ||
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| + | <html><a href="https://2009.igem.org/Team:Imperial_College_London/M3/Genetic/Dam"><img style="vertical-align:bottom;" width=50px align="left" src="http://i691.photobucket.com/albums/vv271/dk806/II09_Learnmore.png"></a></html> <b><i>About Dam methylase.</i></b> <br> | ||
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| + | ==Video== | ||
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| + | <center> | ||
| + | <object width="425" height="344"><param name="movie" value="http://www.youtube.com/v/xU5mnYAlfBE&color1=0xb1b1b1&color2=0xcfcfcf&hl=en&feature=player_embedded&fs=1"></param><param name="allowFullScreen" value="true"></param><param name="allowScriptAccess" value="always"></param><embed src="http://www.youtube.com/v/xU5mnYAlfBE&color1=0xb1b1b1&color2=0xcfcfcf&hl=en&feature=player_embedded&fs=1" type="application/x-shockwave-flash" allowfullscreen="true" allowScriptAccess="always" width="425" height="344"></embed></object> | ||
| + | </center> | ||
| + | </html> | ||
{{Imperial/09/Division}} | {{Imperial/09/Division}} | ||
<center><b>Module 3 - Genome Deletion</b></center> | <center><b>Module 3 - Genome Deletion</b></center> | ||
| - | <html><center><a href="https://2009.igem.org/Team:Imperial_College_London/M3"><img style="vertical-align:bottom;" width="20%" src="http://i691.photobucket.com/albums/vv271/dk806/II09_Homepageimage3.png"></a><a href="https://2009.igem.org/Team:Imperial_College_London/M3/RestrictionEnzymes"><img style="vertical-align:bottom;" width="20%" src="http://i691.photobucket.com/albums/vv271/dk806/ | + | <html><center><a href="https://2009.igem.org/Team:Imperial_College_London/M3"><img style="vertical-align:bottom;" width="20%" src="http://i691.photobucket.com/albums/vv271/dk806/II09_Homepageimage3.png"></a><a href="https://2009.igem.org/Team:Imperial_College_London/M3/RestrictionEnzymes"><img style="vertical-align:bottom;" width="20%" src="http://i691.photobucket.com/albums/vv271/dk806/II09_Drylabmainimage5.png"></a><a |
href="https://2009.igem.org/Team:Imperial_College_London/M3/DamMethylation"><img style="vertical-align:bottom;" width="20%" src="http://i691.photobucket.com/albums/vv271/dk806/II09_Homepageimage3.png"></a><a | href="https://2009.igem.org/Team:Imperial_College_London/M3/DamMethylation"><img style="vertical-align:bottom;" width="20%" src="http://i691.photobucket.com/albums/vv271/dk806/II09_Homepageimage3.png"></a><a | ||
| - | href="https://2009.igem.org/Team:Imperial_College_London/ | + | href="https://2009.igem.org/Team:Imperial_College_London/Wetlab/Results#Module_3"><img style="vertical-align:bottom;" width="20%" src="http://i691.photobucket.com/albums/vv271/dk806/II09_Wetlabmainimage9.png"></a><html><a href="https://2009.igem.org/Team:Imperial_College_London/M3/Modelling"><img style="vertical-align:bottom;" width="20%" src="http://i691.photobucket.com/albums/vv271/dk806/II09_Drylabmainimage6.png"></a><center></html> |
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| - | href="https://2009.igem.org/Team:Imperial_College_London/M3/Modelling"><img style="vertical-align:bottom;" width="20%" src="http://i691.photobucket.com/albums/vv271/dk806/ | + | |
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<html><table border="0" style="background-color:transparent;" width="100%"> | <html><table border="0" style="background-color:transparent;" width="100%"> | ||
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<td width="20%"><center><a href="/Team:Imperial_College_London/M3/RestrictionEnzymes"><b>Restriction Enzymes</b></a></center></td> | <td width="20%"><center><a href="/Team:Imperial_College_London/M3/RestrictionEnzymes"><b>Restriction Enzymes</b></a></center></td> | ||
| - | <td width="20%"><center><a href="https://2009.igem.org/Team:Imperial_College_London/M3/DamMethylation"><b> | + | <td width="20%"><center><a href="https://2009.igem.org/Team:Imperial_College_London/M3/DamMethylation"><b>DAM Methylation</b></a></center></td> |
| - | <td width="20%"><center><a href="https://2009.igem.org/Team:Imperial_College_London/ | + | <td width="20%"><center><a href="https://2009.igem.org/Team:Imperial_College_London/Wetlab/Results#Module_3"><b>Wet Lab</b></a></center></td> |
<td width="20%"><center><a | <td width="20%"><center><a | ||
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<td width="1%"></td> | <td width="1%"></td> | ||
</tr></table></html> | </tr></table></html> | ||
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| + | <html><center><a href="https://2009.igem.org/Team:Imperial_College_London/M3#Module_3_Contents"><img width=150px src="https://static.igem.org/mediawiki/2009/1/10/II09_TourArrow.png"></a> | ||
| + | </html> | ||
{{Imperial/09/TemplateBottom}} | {{Imperial/09/TemplateBottom}} | ||
Latest revision as of 21:29, 17 October 2009
Contents |
M3 Genetic Circuit
Genetic Circuit
Elaboration
This is the genetic circuit for Module 3. Thermally induced genome deletion is kicked off when the temperature is increased to 42°C.
This construct has two main components. The first component controls the production of restriction enzymes DpnII and TaqI. The second component ensures the production of Dam methylase, which protects the DNA.
Protein production and encapsulation occurs at 28°C. In addition, protein cI857 is produced constitutively at 28°C. It represses the lambda cI promoter, inhibiting restriction enzyme production. The production of Dam methylase protects the E. coli DNA, preventing basal levels of restriction enzyme from causing premature cell death.
When sufficient protein is being produced and encapsulation is complete, the temperature will be increased to 42°C. This results in the denaturing of the cI857 repressor. This activates the pLambda promoter and restriction enzymes DpnII and TaqI will be produced. Dam methylase will be insufficient to protect the E. coli DNA from being cut and genome deletion would occur. This causes cell death and destruction of possible pathogenicity from E. coli.
About DpnII and TaqI.
About Dam methylase.
Video
