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Team:DTU Denmark/USERprogramoutputformat
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<p align="justify">Like the input options, the output from the program is kept simple. First an overview of all needed primers is shown. The output is fairly self-explanatory, although it should be noted that primer consist of a fusion tail (ft) and a binding region (br), easily distinguished from one another by the occurence of the essential uracil. For example:</p><br> | <p align="justify">Like the input options, the output from the program is kept simple. First an overview of all needed primers is shown. The output is fairly self-explanatory, although it should be noted that primer consist of a fusion tail (ft) and a binding region (br), easily distinguished from one another by the occurence of the essential uracil. For example:</p><br> | ||
| - | <font face=" | + | <font face="Lucida Console" size="2.5"> |
| - | |--ft--||-------br-------| | + | |--ft--||-------br-------|<br> |
GGGTTAAUCAAATTATAGCCATACAG | GGGTTAAUCAAATTATAGCCATACAG | ||
</font><br> | </font><br> | ||
Revision as of 13:34, 18 October 2009
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The redoxilator - Introduction - Results - Applications and perspectives The USERTM assembly standard - Principle - Proof of concept - Manual USERTM fusion primer design software - Abstract - Instructions - Output format |
The project USER fusion primer design software Program output format Like the input options, the output from the program is kept simple. First an overview of all needed primers is shown. The output is fairly self-explanatory, although it should be noted that primer consist of a fusion tail (ft) and a binding region (br), easily distinguished from one another by the occurence of the essential uracil. For example: |--ft--||-------br-------| GGGTTAAUCAAATTATAGCCATACAG Note that the entire sequence constitute the primer |
Synthetic Biology “Synthetic Biology is an art of engineering new biological systems that don’t exist in nature.” -Paras Chopra & Akhil Kamma In nature, biological molecules work together in complex systems to serve purposes of the cell. In synthetic biology these molecules are used as individual functional units that are combined to form tailored systems exhibiting complex dynamical behaviour. From ‘design specifications’ generated from computational modelling, engineering-based approaches enables the construction of such new specified gene-regulatory networks. The ultimate goal of synthetic biology is to construct systems that gain new functions, and the perspectives of the technology are enormous. It has already been used in several medical projects2 and is predicted to play a major role in biotech-production and environmental aspects. |
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