Team:USTC Software/Database
From 2009.igem.org
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==Basic Description== | ==Basic Description== | ||
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==Instructions== | ==Instructions== | ||
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1.Input the tolerance of deviation of stored reactions from idea identified parameters in percentage (temporarily confined to 0% to 1000%);<br /> | 1.Input the tolerance of deviation of stored reactions from idea identified parameters in percentage (temporarily confined to 0% to 1000%);<br /> | ||
2.How many results counting down from the top of the list do you want to see? Input an integer no bigger than 10;<br /> | 2.How many results counting down from the top of the list do you want to see? Input an integer no bigger than 10;<br /> | ||
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[[Image:ITinCP_database_ustcsw.png|left|frame|300px|Independent test in console application]] | [[Image:ITinCP_database_ustcsw.png|left|frame|300px|Independent test in console application]] | ||
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4.If ordered itself, the database will be capable to offer higher searching efficiency;<br /> | 4.If ordered itself, the database will be capable to offer higher searching efficiency;<br /> | ||
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Revision as of 20:18, 18 October 2009
About | Team and People | Project | Standard | Notebook | Demo | Safety | External Links |
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Basic DescriptionThe Database part is designated to build up the bridge combining the abstract parameters yielded by the System Identification process and the concrete needs from users via SBML. Therefore, corresponding to its transitive role here, the inputs and outputs of this part is similarity characterized. The Functions1.Filter all matching reactions from the database via matching suitable parameters of all terms of the ODE array, provided by preceding GA and PSO part; Abstract and approximation1.All bio-chemical reactions on the genetic level are characterized in a finite set of reaction types, specifically as listed in Media:keneticlaw.png here; Data Structure and Organizationstruct reactor{ int rnum;//number of reactants char **ract;//names of reactants }; struct product{ int pnum;//number of products char **prdt;//names of products }; struct reaction{ int num;//reaction number struct reactor RACT;//info of reactants struct product PRDT;//info of products int type;//reaction type as listed in keneticlaw.pdf double *para;//all parameters char note[MAXLEN];//self-defined notes }; VisualizationInstructions{
1.Input the tolerance of deviation of stored reactions from idea identified parameters in percentage (temporarily confined to 0% to 1000%); Outputsdbt0.dat, dbt1.dat …, dbt9.dat: all reactions contained in best ten models Defects1.Not ready for repeated searches at one traverse of the original database; | Col3 | Col4 |