"
Team:UNIPV-Pavia/Software
From 2009.igem.org
m |
|||
| (33 intermediate revisions not shown) | |||
| Line 13: | Line 13: | ||
<table width="100%"> | <table width="100%"> | ||
<tr> | <tr> | ||
| - | <td valign="top" width= "23%" rowspan=" | + | <td valign="top" width= "23%" rowspan="3"> |
{{UNIPV-Pavia/Menu}} | {{UNIPV-Pavia/Menu}} | ||
</td> | </td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
| - | <td> | + | <html> |
| - | + | <td align="right"><br/><br/> | |
| + | <font face="Pristina" size="50"><b>SequenceAlignment</b></font><br><br><br> | ||
| + | |||
| + | </td> | ||
| + | </html> | ||
| + | <td width="50px"> | ||
| + | </td> | ||
| - | We developed this tool to speed up the quality control of the | + | </tr> |
| - | It’s a Matlab graphics interface that allows you to align | + | <tr> |
| + | <td valign="top"> | ||
| + | We developed this tool to speed up the quality control of the assembled BioBricks. | ||
| + | It’s a Matlab graphics interface that allows you to align the results of the sequencing procedures with expected sequences, built up assembling simple parts (BioBricks) according to the rules of Standard Assembly (modality of use Compare Sequence/BioBrick). | ||
It offers also the possibility of simply align two sequences (modality of use Compare | It offers also the possibility of simply align two sequences (modality of use Compare | ||
| - | two Sequences ). | + | two Sequences). |
| + | |||
| + | SequenceAlignment executable files for Windows platforms and the relative <html><a href="http://aimed11.unipv.it/SequenceAlignment/example.pdf" target="_blank">User's Guide</a></html> can be downloaded free of charge for non-profit institutions from the following web site: | ||
| + | <html><a href="http://aimed11.unipv.it/SequenceAlignment" target="_blank">Download SequenceAlignment</a></html>. | ||
| + | |||
| + | |||
| + | [[Image:Unipv_compareSB_main.png |500px|Modality of use Compare Sequence/BioBrick|thumb|center|Modality of use Compare Sequence/BioBrick]] | ||
| + | |||
| + | |||
| + | |||
| + | [[Image:unipv_Compare2seq.png |500px|Modality of use Compare two Sequences|thumb|center|Modality of use Compare two Sequences]] | ||
| + | |||
| + | |||
| + | |||
| + | [[Image:unipv_Compare2seq_funz.png |500px|Modality of use Compare Sequence/BioBrick|thumb|center|Modality of use Compare Sequence/BioBrick at work]] | ||
| + | |||
| + | |||
| + | |||
| + | [[Image:Unipv_Report.png |500px|Modality of use Compare Sequence/BioBrick|thumb|center|An example of Report (modality of use Compare Sequence/BioBrick)]] | ||
| - | |||
| - | |||
</td> | </td> | ||
| - | <td width=" | + | <td width="50px"> |
</td> | </td> | ||
</tr> | </tr> | ||
</table> | </table> | ||
Latest revision as of 23:13, 19 October 2009
|
|
|
|
SequenceAlignment |
|
|
We developed this tool to speed up the quality control of the assembled BioBricks. It’s a Matlab graphics interface that allows you to align the results of the sequencing procedures with expected sequences, built up assembling simple parts (BioBricks) according to the rules of Standard Assembly (modality of use Compare Sequence/BioBrick). It offers also the possibility of simply align two sequences (modality of use Compare two Sequences). SequenceAlignment executable files for Windows platforms and the relative User's Guide can be downloaded free of charge for non-profit institutions from the following web site: Download SequenceAlignment.
|
