Team:HKUST/Protocols/Ethanol precipitation
From 2009.igem.org
(Difference between revisions)
(New page: 8. Ethanol precipitation Purpose: To concentrate DNA product. Materials: 100% ethanol, 75% ethanol, 3M NaAc, ddH2O, DNA product Procedure: a.Add 2 volume of 100% ethanol. b....) |
|||
(2 intermediate revisions not shown) | |||
Line 1: | Line 1: | ||
- | + | <html xmlns="http://www.w3.org/1999/xhtml"> | |
- | + | <head> | |
- | + | <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" /> | |
- | + | <link href="http://igem2009hkust.fileave.com/wiki/template/12092009/style.css " rel="stylesheet" type="text/css" /> | |
- | + | <title>Salt and Soap template</title> | |
- | b.Add 0.1 volume of 3M NaAc. | + | </head> |
- | c.Put the tube in fridge at -20 °C for 10 minutes. | + | |
- | d.Put it out and centrifuge it for 10-15 minutes (13,000 rpm). Remove the supernatant. | + | <bodyxx> |
- | e.Wash with 100μL 75% ethanol. | + | <div id="containerxx"> |
- | f.Centrifuge for 5 minutes (13,000 rpm). Remove all the supernatant. | + | <div id="headerxx"> |
- | g.Add 10μL ddH2O to resuspend DNA. | + | |
- | + | </div> | |
- | + | <div id="borderxx"> | |
- | + | <div id="mainxx"> | |
+ | <div id="leftxx"> | ||
+ | <div id="menuxx"> | ||
+ | <ul> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST">Home</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Team">Our Team</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Project">Project Description</a></li> | ||
+ | |||
+ | <b> | ||
+ | <span style="color:green"> | ||
+ | <li>Main Parts</li> | ||
+ | </span> | ||
+ | </b> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/OdorantSensing">Odorant Sensing</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/AttractantProduction">Attractant Production</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/ToxinProduction">Toxin Production</a></li> | ||
+ | |||
+ | <b> | ||
+ | <span style="color:green"> | ||
+ | <li>Resources</li> | ||
+ | </span> | ||
+ | </b> | ||
+ | |||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Lab Notebook">Lab Notebook</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Parts">Parts Submitted </a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Protocols">Protocol List</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Resourses">Other Resources</a></li> | ||
+ | </ul> | ||
+ | </div> | ||
+ | <div id="menubottom"> | ||
+ | <ul> | ||
+ | <li><a href="https://2009.igem.org/Team:Gallery">Gallery</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:Biosafety">Biosafety</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:Acknowledgement">Acknowledgement</a></li> | ||
+ | </ul> | ||
+ | </div> | ||
+ | </div> | ||
+ | <div id="rightxx"> | ||
+ | <div class="contentlist"> <h3>a</h3> | ||
+ | </div> | ||
+ | <div class="contentxx"> | ||
+ | |||
+ | <p>Ethanol precipitation</p> | ||
+ | |||
+ | <p> Purpose: To concentrate DNA product.</p> | ||
+ | Materials: 100% ethanol, 75% ethanol, 3M NaAc, ddH2O, DNA product<br> <br> | ||
+ | |||
+ | <p>Procedure: </p> | ||
+ | a.Add 2 volume of 100% ethanol.<br> | ||
+ | b.Add 0.1 volume of 3M NaAc.<br> | ||
+ | c.Put the tube in fridge at -20 °C for 10 minutes.<br> | ||
+ | d.Put it out and centrifuge it for 10-15 minutes (13,000 rpm). Remove the supernatant.<br> | ||
+ | e.Wash with 100μL 75% ethanol.<br> | ||
+ | f.Centrifuge for 5 minutes (13,000 rpm). Remove all the supernatant.<br> | ||
+ | g.Add 10μL ddH2O to resuspend DNA.<br> | ||
+ | <p> Tips: </p> | ||
+ | A.If the volume of DNA product is too low, make it to higher volume with ddH2O. The recommended lowest volume is 50μL. Combine several tubes of DNA product is also suggested for higher DNA product concentration.<br> | ||
+ | B. In step f, make sure to remove all the supernatant without touching the pellet. If it is too hard to do so, open the tube and leave it at room temperature for a while to make the ethanol evaporate. <br><br> | ||
+ | |||
+ | <ul> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Protocols/Agarose_gel" >Agarose gel preparation and gel | ||
+ | electrophoresis</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Protocols/PCR">PCR (Taq, Vent)</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Protocols/PCR_cleanup">PCR product clean-up</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Protocols/Enzyme_digestion"> Enzyme digestion (vector, insert)</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Protocols/plasmid_extraction"> Plasmid DNA extraction</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Protocols/gel_cut"> Gel cutting</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Protocols/gel_extraction"> Gel extraction</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Protocols/Ethanol_precipitation"> Ethanol precipitation</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Protocols/Ligation"> Ligation</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Protocols/Transformation_to_Ecoli"> Transformation to E.coli</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Protocols/Transformation_to_yeast">Transformation to | ||
+ | yeast</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Protocols/Cell_lysis"> Cell lysis</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Protocols/Yeast_genomic_DNA_extraction"> Yeast genomic DNA | ||
+ | extraction</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Protocols/Western_blotting"> Western blotting</a></li> | ||
+ | <li><a href="https://2009.igem.org/Team:HKUST/Protocols/GFP_testing"> GFP testing</a></li> | ||
+ | |||
+ | </ul> | ||
+ | |||
+ | </div> | ||
+ | <div class="productxx"> | ||
+ | |||
+ | <div class="clear"></div> | ||
+ | </div> | ||
+ | </div> | ||
+ | <div class="clear"></div> | ||
+ | </div> | ||
+ | </div> | ||
+ | <div id="footerxx"> | ||
+ | <div id="copyright"> | ||
+ | <span> iGEM 2009 <br /> </span> | ||
+ | </div> | ||
+ | <div id="payment"><img src="http://igem2009hkust.fileave.com/wiki/template/12092009/images/HKUSTLogo.jpg" alt="HKUST" /></div> | ||
+ | </div> | ||
+ | <div id="footerend"></div> | ||
+ | </div> | ||
+ | </bodyxx> | ||
+ | </html> |
Latest revision as of 09:56, 20 October 2009
a
Ethanol precipitation
Purpose: To concentrate DNA product.
Materials: 100% ethanol, 75% ethanol, 3M NaAc, ddH2O, DNA productProcedure:
a.Add 2 volume of 100% ethanol.b.Add 0.1 volume of 3M NaAc.
c.Put the tube in fridge at -20 °C for 10 minutes.
d.Put it out and centrifuge it for 10-15 minutes (13,000 rpm). Remove the supernatant.
e.Wash with 100μL 75% ethanol.
f.Centrifuge for 5 minutes (13,000 rpm). Remove all the supernatant.
g.Add 10μL ddH2O to resuspend DNA.
Tips:
A.If the volume of DNA product is too low, make it to higher volume with ddH2O. The recommended lowest volume is 50μL. Combine several tubes of DNA product is also suggested for higher DNA product concentration.B. In step f, make sure to remove all the supernatant without touching the pellet. If it is too hard to do so, open the tube and leave it at room temperature for a while to make the ethanol evaporate.
- Agarose gel preparation and gel electrophoresis
- PCR (Taq, Vent)
- PCR product clean-up
- Enzyme digestion (vector, insert)
- Plasmid DNA extraction
- Gel cutting
- Gel extraction
- Ethanol precipitation
- Ligation
- Transformation to E.coli
- Transformation to yeast
- Cell lysis
- Yeast genomic DNA extraction
- Western blotting
- GFP testing