Team:Stanford/NotebookPage/18 August 2009

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(New page: {{Template:MainMenu}} ==Events== *'''9am meeting w/ Grad Student''' **Anusuya w/ IBD and Immune System ***Not so much Immunology.... ***Emphasize work w/ Il-10 treatment= PRECEDENT ***Nee...)
 
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==Events==
==Events==

Latest revision as of 20:29, 20 October 2009

Home Project Modeling Parts Notebook Team SBOL-V

June
MTWTFSS
[http://2009.igem.org/Team:Stanford/NotebookPage/1_June_2009 1] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/2_June_2009&action=edit 2] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/3_June_2009&action=edit 3] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/4_June_2009&action=edit 4] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/5_June_2009&action=edit 5] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/6_June_2009&action=edit 6] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/7_June_2009&action=edit 7]
[http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/8_June_2009&action=edit 8] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/9_June_2009&action=edit 9] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/10_June_2009&action=edit 10] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/11_June_2009&action=edit 11] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/12_June_2009&action=edit 12] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/13_June_2009&action=edit 13] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/14_June_2009&action=edit 14]
[http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/15_June_2009&action=edit 15] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/16_June_2009&action=edit 16] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/17_June_2009&action=edit 17] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/18_June_2009&action=edit 18] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/19_June_2009&action=edit 19] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/20_June_2009&action=edit 20] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/21_June_2009&action=edit 21]
[http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/22_June_2009&action=edit 22] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/23_June_2009&action=edit 23] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/24_June_2009&action=edit 24] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/25_June_2009&action=edit 25] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/26_June_2009&action=edit 26] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/27_June_2009&action=edit 27] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/28_June_2009&action=edit 28]
[http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/29_June_2009&action=edit 29] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/30_June_2009&action=edit 30]
July
MTWTFSS
    [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/1_July_2009&action=edit 1] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/2_July_2009&action=edit 2] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/3_July_2009&action=edit 3] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/4_July_2009&action=edit 4] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/5_July_2009&action=edit 5]
[http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/6_July_2009&action=edit 6] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/7_July_2009&action=edit 7] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/8_July_2009&action=edit 8] [http://2009.igem.org/Team:Stanford/NotebookPage/9_July_2009 9] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/10_July_2009&action=edit 10] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/11_July_2009&action=edit 11] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/12_July_2009&action=edit 12]
[http://2009.igem.org/Team:Stanford/NotebookPage/13_July_2009 13] [http://2009.igem.org/Team:Stanford/NotebookPage/14_July_2009 14] [http://2009.igem.org/Team:Stanford/NotebookPage/15_July_2009 15] [http://2009.igem.org/Team:Stanford/NotebookPage/16_July_2009 16] [http://2009.igem.org/Team:Stanford/NotebookPage/17_July_2009 17] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/18_July_2009&action=edit 18] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/19_July_2009&action=edit 19]
[http://2009.igem.org/Team:Stanford/NotebookPage/20_July_2009 20] [http://2009.igem.org/Team:Stanford/NotebookPage/21_July_2009 21] [http://2009.igem.org/Team:Stanford/NotebookPage/22_July_2009 22] [http://2009.igem.org/Team:Stanford/NotebookPage/23_July_2009 23] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/24_July_2009&action=edit 24] [http://2009.igem.org/Team:Stanford/NotebookPage/25_July_2009 25] [http://2009.igem.org/Team:Stanford/NotebookPage/26_July_2009 26]
[http://2009.igem.org/Team:Stanford/NotebookPage/27_July_2009 27] [http://2009.igem.org/Team:Stanford/NotebookPage/28_July_2009 28] [http://2009.igem.org/Team:Stanford/NotebookPage/29_July_2009 29] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/30_July_2009&action=edit 30] [http://2009.igem.org/Team:Stanford/NotebookPage/31_July_2009 31]
August
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          [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/1_August_2009&action=edit 1] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/2_August_2009&action=edit 2]
[http://2009.igem.org/Team:Stanford/NotebookPage/3_August_2009 3] [http://2009.igem.org/Team:Stanford/NotebookPage/4_August_2009 4] [http://2009.igem.org/Team:Stanford/NotebookPage/5_August_2009 5] [http://2009.igem.org/Team:Stanford/NotebookPage/6_August_2009 6] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/7_August_2009&action=edit 7] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/8_August_2009&action=edit 8] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/9_August_2009&action=edit 9]
[http://2009.igem.org/Team:Stanford/NotebookPage/10_August_2009 10] [http://2009.igem.org/Team:Stanford/NotebookPage/11_August_2009 11] [http://2009.igem.org/Team:Stanford/NotebookPage/12_August_2009 12] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/13_August_2009&action=edit 13] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/14_August_2009&action=edit 14] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/15_August_2009&action=edit 15] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/16_August_2009&action=edit 16]
[http://2009.igem.org/Team:Stanford/NotebookPage/17_August_2009 17] [http://2009.igem.org/Team:Stanford/NotebookPage/18_August_2009 18] [http://2009.igem.org/Team:Stanford/NotebookPage/19_August_2009 19] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/20_August_2009&action=edit 20] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/21_August_2009&action=edit 21] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/22_August_2009&action=edit 22] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/23_August_2009&action=edit 23]
[http://2009.igem.org/Team:Stanford/NotebookPage/24_August_2009 24] [http://2009.igem.org/Team:Stanford/NotebookPage/25_August_2009 25] [http://2009.igem.org/Team:Stanford/NotebookPage/26_August_2009 26] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/27_August_2009&action=edit 27] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/28_August_2009&action=edit 28] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/29_August_2009&action=edit 29] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/30_August_2009&action=edit 30]
[http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/31_August_2009&action=edit 31]
September
MTWTFSS
  [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/1_September_2009&action=edit 1] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/2_September_2009&action=edit 2] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/3_September_2009&action=edit 3] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/4_September_2009&action=edit 4] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/5_September_2009&action=edit 5] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/6_September_2009&action=edit 6]
[http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/7_September_2009&action=edit 7] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/8_September_2009&action=edit 8] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/9_September_2009&action=edit 9] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/10_September_2009&action=edit 10] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/11_September_2009&action=edit 11] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/12_September_2009&action=edit 12] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/13_September_2009&action=edit 13]
[http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/14_September_2009&action=edit 14] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/15_September_2009&action=edit 15] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/16_September_2009&action=edit 16] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/17_September_2009&action=edit 17] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/18_September_2009&action=edit 18] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/19_September_2009&action=edit 19] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/20_September_2009&action=edit 20]
[http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/21_September_2009&action=edit 21] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/22_September_2009&action=edit 22] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/23_September_2009&action=edit 23] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/24_September_2009&action=edit 24] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/25_September_2009&action=edit 25] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/26_September_2009&action=edit 26] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/27_September_2009&action=edit 27]
[http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/28_September_2009&action=edit 28] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/29_September_2009&action=edit 29] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/30_September_2009&action=edit 30]
October
MTWTFSS
      [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/1_October_2009&action=edit 1] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/2_October_2009&action=edit 2] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/3_October_2009&action=edit 3] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/4_October_2009&action=edit 4]
[http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/5_October_2009&action=edit 5] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/6_October_2009&action=edit 6] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/7_October_2009&action=edit 7] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/8_October_2009&action=edit 8] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/9_October_2009&action=edit 9] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/10_October_2009&action=edit 10] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/11_October_2009&action=edit 11]
[http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/12_October_2009&action=edit 12] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/13_October_2009&action=edit 13] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/14_October_2009&action=edit 14] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/15_October_2009&action=edit 15] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/16_October_2009&action=edit 16] [http://2009.igem.org/Team:Stanford/NotebookPage/17_October_2009 17] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/18_October_2009&action=edit 18]
[http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/19_October_2009&action=edit 19] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/20_October_2009&action=edit 20] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/21_October_2009&action=edit 21] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/22_October_2009&action=edit 22] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/23_October_2009&action=edit 23] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/24_October_2009&action=edit 24] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/25_October_2009&action=edit 25]
[http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/26_October_2009&action=edit 26] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/27_October_2009&action=edit 27] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/28_October_2009&action=edit 28] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/29_October_2009&action=edit 29] [http://2009.igem.org/Team:Stanford/NotebookPage/30_October_2009 30] [http://2009.igem.org/wiki/index.php?title=Team:Stanford/NotebookPage/31_October_2009&action=edit 31]

Events

  • 9am meeting w/ Grad Student
    • Anusuya w/ IBD and Immune System
      • Not so much Immunology....
      • Emphasize work w/ Il-10 treatment= PRECEDENT
      • Need slide w/ differentiation
      • Too many slides
      • Symptoms- mention somewhere else but don't necessarily need its own slide
        • Is video necessary?
      • Emphasize why our therapy is BETTER
        • Awesomeness on 1 slide - update advantages slide to compare to current therapy
        • Table? Larger font?
      • Answer question more clearly about why we need device 2
    • Suzie's Slides w/ Constructions
      • Slide 1 - colored lines and provide key
      • Slide 2 - mention vBOL
      • Slide 3 - ask about sequences leading to protein- is it correct? Add arrows
        • Graph Larger
      • Slide 4- Easiest to understand and just label important parts..weak constitutive beta carotene?? OR not?
      • Slide 5 - metadata?
      • Slie 6- rest.... revise for device 2... const export system?
    • Mark and lab update...
      • Cultures of parts... mini-prep and pcr w/ new primers...


  • 5:30 meeting w/ Clinician
    • Update From Meeting with IBD Specialist Dr. Shamita Shah
      • Good News
        • Fully supportive of the concept
        • Understands importance of and our reasoning behind both devices
        • Supports probiotic research
        • Enthusiastic for future implications of this device as a “treatment/diagnostic tool”
        • Willing to share her own slides on IBD and give 20 presentation on her current knowledge
          • She has great statistics and can help us frame our device to tailor to a specific target audience
      • Next Steps
        • Decide what “phase” of IBD we want to target
        • Early diagnostic… difficult to distinguish between UC and Crohn’s, but certainly useful
        • Complementary treatment: use as another “tool” for clinicians
        • Post-treatment diagnostic to prevent recurrence…
        • Dr. Shah sees this as the most promising and necessary right now w/ regards to treatment
        • No previous probiotic research in this field
        • Many cases lead to recurrence- and patients need annual colonic scopes
      • Meet w/ Dr. Shah again early September
      • Challenges
        • We need numbers…
        • The “ratio” needs to be known or better understood and Dr. Shah doesn’t collect these numbers
        • When/how will the device be “triggered” with regards to these numbers?
        • Switch bacterial strain to be more sustainable in the small intestine?
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