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Team:Groningen/Brainstorm/Modelling
From 2009.igem.org
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==Systems from previous years== | ==Systems from previous years== | ||
| + | |||
| + | *RNA folding (secondary structure) | ||
| + | **[https://2008.igem.org/Team:Alberta_NINT/Modeling Alberta 2008], using [http://rna.urmc.rochester.edu/rnastructure.html RNAstructure] and UNAFold (with a front-end), they used both programs (presumably to get an idea of the certainty) | ||
| + | *Molecular Circuit (?) | ||
| + | **[https://2008.igem.org/Team:Bologna/Modeling Bologna 2008], using Simulink (Mathworks) | ||
| + | **[https://2008.igem.org/Team:ETH_Zurich/Modeling/Switch_Circuit ETH Zurich 2008], using the Symbiology toolbox in Matlab | ||
| + | *Cell processes | ||
| + | **[https://2008.igem.org/Modeling Calgary 2008], using their own tool (transcription and translation) | ||
| + | *Static genome analysis (?) | ||
| + | **[https://2008.igem.org/Team:ETH_Zurich/Modeling/Genome_Static_Analysis ETH Zurich 2008], using their own tool | ||
| + | *Genome Scale Model (cell physiology) | ||
| + | **[https://2008.igem.org/Team:ETH_Zurich/Modeling/Genome-Scale_Model ETH Zurich 2008] | ||
==Literature== | ==Literature== | ||
See our [[Team:Groningen/Literature/Modelling|literature list]]. For our team members that are looking for books on the subject, have a look under code 605B (Bernoulliborg library, lower floor). | See our [[Team:Groningen/Literature/Modelling|literature list]]. For our team members that are looking for books on the subject, have a look under code 605B (Bernoulliborg library, lower floor). | ||
Revision as of 09:32, 22 April 2009
Systems from previous years
- RNA folding (secondary structure)
- Alberta 2008, using [http://rna.urmc.rochester.edu/rnastructure.html RNAstructure] and UNAFold (with a front-end), they used both programs (presumably to get an idea of the certainty)
- Molecular Circuit (?)
- Bologna 2008, using Simulink (Mathworks)
- ETH Zurich 2008, using the Symbiology toolbox in Matlab
- Cell processes
- Calgary 2008, using their own tool (transcription and translation)
- Static genome analysis (?)
- ETH Zurich 2008, using their own tool
- Genome Scale Model (cell physiology)
Literature
See our literature list. For our team members that are looking for books on the subject, have a look under code 605B (Bernoulliborg library, lower floor).
