"
Team:Groningen/Graphs/GlpFTransport
From 2009.igem.org
(Difference between revisions)
(Do not graph all data points.) |
m (Some optimizations (I hope).) |
||
| Line 3: | Line 3: | ||
Vcells=Number(document.getElementById('Vcells').value)*1e-6,\ | Vcells=Number(document.getElementById('Vcells').value)*1e-6,\ | ||
Vtotal=Number(document.getElementById('Vtotal').value)*1e-6,\ | Vtotal=Number(document.getElementById('Vtotal').value)*1e-6,\ | ||
| - | + | Vmaxnorm=Number(document.getElementById('Vmax').value),\ | |
K=Number(document.getElementById('KGlpF').value)*1e-6;\ | K=Number(document.getElementById('KGlpF').value)*1e-6;\ | ||
| - | var | + | var Vmediumdivcells = (Vtotal - Vcells)/Vcells;\ |
| + | var Vmax = Vmaxnorm*Vcells;\ | ||
var ddata=new Array(data.length);\ | var ddata=new Array(data.length);\ | ||
| + | var n=data.length, j;\ | ||
var d=[{title:'As(III)<sub>ex</sub>',data:[],args:{plot:'outer'}},\ | var d=[{title:'As(III)<sub>ex</sub>',data:[],args:{plot:'outer'}},\ | ||
{title:'As(III)',data:[],args:{plot:'inner'}}];\ | {title:'As(III)',data:[],args:{plot:'inner'}}];\ | ||
| - | + | j=n; while(j-->0) d[j].data.push({x:0,y:data[j]*1e6});\ | |
for(var i=1; i<=3600; i++) {\ | for(var i=1; i<=3600; i++) {\ | ||
var f=i/60;\ | var f=i/60;\ | ||
| - | ddata[0] = -Vmax | + | ddata[0] = -Vmax*data[0]/(K+data[0]);\ |
| - | ddata[1] = -ddata[0]* | + | ddata[1] = -ddata[0]*Vmediumdivcells;\ |
| - | + | j=n; while(j-->0) data[j] += ddata[j];\ | |
| - | if (i%10==0) | + | if (i%10==0) j=n; while(j-->0) d[j].data.push({x:f,y:data[j]*1e6});\ |
}\ | }\ | ||
d.push({title:'As(III)<sub>ex</sub> Meng2004',\ | d.push({title:'As(III)<sub>ex</sub> Meng2004',\ | ||
Revision as of 09:52, 22 July 2009
{ script: "var data=[Number(document.getElementById('As3exInitial').value)*1e-6,0],\
Vcells=Number(document.getElementById('Vcells').value)*1e-6,\
Vtotal=Number(document.getElementById('Vtotal').value)*1e-6,\
Vmaxnorm=Number(document.getElementById('Vmax').value),\
K=Number(document.getElementById('KGlpF').value)*1e-6;\
var Vmediumdivcells = (Vtotal - Vcells)/Vcells;\
var Vmax = Vmaxnorm*Vcells;\
var ddata=new Array(data.length);\
var n=data.length, j;\
var d=[{title:'As(III)ex',data:[],args:{plot:'outer'}},\
{title:'As(III)',data:[],args:{plot:'inner'}}];\
j=n; while(j-->0) d[j].data.push({x:0,y:data[j]*1e6});\
for(var i=1; i<=3600; i++) {\
var f=i/60;\
ddata[0] = -Vmax*data[0]/(K+data[0]);\
ddata[1] = -ddata[0]*Vmediumdivcells;\
j=n; while(j-->0) data[j] += ddata[j];\
if (i%10==0) j=n; while(j-->0) d[j].data.push({x:f,y:data[j]*1e6});\
}\
d.push({title:'As(III)ex Meng2004',\
data:[{x:1,y:8.47076050151002}, {x:10,y:6.51596961654617}, {x:20,y:4.3195753637778},\
{x:40,y:1.72783014551112}, {x:60,y:0.9371282145145}],\
args:{plot: 'outer', stroke: {style:'Dash'}}});\
d.push({title:'As(III) Meng2004',\
data:[{x:1,y:101.917808219178}, {x:10,y:394.520547945205}, {x:20,y:723.287671232877},\
{x:40,y:1111.23287671233}, {x:60,y:1229.58904109589}],\
args:{plot: 'inner', stroke: {style:'Dash'}}});\
d;",
width: '10cm', height: '8cm', axes: {x: {title: "time (min)", minorLabels: false}, innery: {title: "concentration in cell (µM)", vertical: true, min: 0}, outery: {title: "concentration in solution (µM)", vertical: true, leftBottom: false, min: 0} }, plots: { 'inner': {type: 'Lines', vAxis: 'innery'}, 'outer': {type: 'Lines', vAxis: 'outery'} } }
