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Team:Groningen/Graphs/GlpFTransport
From 2009.igem.org
(Difference between revisions)
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(Updated differential equations.) |
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{ | { | ||
script: "var data=[Number(document.getElementById('As3exInitial').value)*1e-6,0],\ | script: "var data=[Number(document.getElementById('As3exInitial').value)*1e-6,0],\ | ||
| - | Vcells=Number(document.getElementById('Vcells').value) | + | Vcells=Number(document.getElementById('Vcells').value),\ |
| - | Vtotal=Number(document.getElementById('Vtotal').value) | + | Vtotal=Number(document.getElementById('Vtotal').value),\ |
| - | + | v5=Number(document.getElementById('v5').value)*1e-6,\ | |
| - | + | K5=Number(document.getElementById('K5').value)*1e-6;\ | |
| - | var | + | var Vcellsdivmedium = Vcells/(Vtotal - Vcells);\ |
| - | + | ||
var ddata=new Array(data.length);\ | var ddata=new Array(data.length);\ | ||
var n=data.length, j;\ | var n=data.length, j;\ | ||
| Line 14: | Line 13: | ||
for(var i=1; i<=3600; i++) {\ | for(var i=1; i<=3600; i++) {\ | ||
var f=i/60;\ | var f=i/60;\ | ||
| - | ddata[ | + | ddata[1] = v5*data[0]/(K5+data[0]);\ |
| - | ddata[ | + | ddata[0] = -ddata[1]*Vcellsdivmedium ;\ |
j=n; while(j-->0) data[j] += ddata[j];\ | j=n; while(j-->0) data[j] += ddata[j];\ | ||
if (i%10==0) j=n; while(j-->0) d[j].data.push({x:f,y:data[j]*1e6});\ | if (i%10==0) j=n; while(j-->0) d[j].data.push({x:f,y:data[j]*1e6});\ | ||
Revision as of 13:23, 18 August 2009
{ script: "var data=[Number(document.getElementById('As3exInitial').value)*1e-6,0],\
Vcells=Number(document.getElementById('Vcells').value),\
Vtotal=Number(document.getElementById('Vtotal').value),\
v5=Number(document.getElementById('v5').value)*1e-6,\
K5=Number(document.getElementById('K5').value)*1e-6;\
var Vcellsdivmedium = Vcells/(Vtotal - Vcells);\
var ddata=new Array(data.length);\
var n=data.length, j;\
var d=[{title:'As(III)ex',data:[],args:{plot:'outer',stroke: { color: '#8B2500' }}},\
{title:'As(III)',data:[],args:{plot:'inner',stroke: { color: '#FF4500' }}}];\
j=n; while(j-->0) d[j].data.push({x:0,y:data[j]*1e6});\
for(var i=1; i<=3600; i++) {\
var f=i/60;\
ddata[1] = v5*data[0]/(K5+data[0]);\
ddata[0] = -ddata[1]*Vcellsdivmedium ;\
j=n; while(j-->0) data[j] += ddata[j];\
if (i%10==0) j=n; while(j-->0) d[j].data.push({x:f,y:data[j]*1e6});\
}\
d.push({title:'As(III)ex Meng2004',\
data:[{x:1,y:8.47076050151002}, {x:10,y:6.51596961654617}, {x:20,y:4.3195753637778},\
{x:40,y:1.72783014551112}, {x:60,y:0.9371282145145}],\
args:{plot: 'outer', stroke: { color: '#8B2500' }}});\
d.push({title:'As(III) Meng2004',\
data:[{x:1,y:101.917808219178}, {x:10,y:394.520547945205}, {x:20,y:723.287671232877},\
{x:40,y:1111.23287671233}, {x:60,y:1229.58904109589}],\
args:{plot: 'inner', stroke: { color: '#FF4500' }}});\
for(j=n; j<d.length; j++) d[j].args.stroke.style = 'Dash';\
d;",
width: '10cm', height: '8cm', axes: {x: {title: "time (min)", minorLabels: false}, innery: {title: "concentration in cell (µM)", vertical: true, min: 0}, outery: {title: "concentration in solution (µM)", vertical: true, leftBottom: false, min: 0} }, plots: { 'inner': {type: 'Lines', vAxis: 'innery'}, 'outer': {type: 'Lines', vAxis: 'outery'} } }
