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Team:Illinois-Tools/Notebook/Week4
From 2009.igem.org
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'''Donny''' | '''Donny''' | ||
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| + | I have compiled a dictionary of over 200 chemicals determined by the EPA to be toxic linked to their respective Kegg IDs. I followed the tutorials for creating a webpage with django and have decided that this will be a good fit for our project. The dictionary of chemicals was made into an HTML drop down menu. In the upcoming weeks, I will make the html form linked to our SQL database so that it can be automatically updated as the EPA list is updated. I am working on making a simple layout for the page where the user can select a toxin from a list as well as select a desired product- the page will respond to these selections and indicate that it recognizes the choices made. Although this is an unimpressive feat, it will lay some foundation for our pages IO. I am also currently investigating how to improve the pathfinding algorithm that Palek found on the net. It is nowhere near efficient enough for our purposes. Ideally, this algorithm will be able to quickly scan the huge network of reactions and show every possible series of reactions that can go from input compound to output compound. Unfortunately, this is only the beginning because we will have to then determine our method of choosing which path will be the most realistic and also optimal in the sense of production. | ||
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| + | In other news, I'm still not on the Illinois iGEM mailing list so I don't find out about things like team beer pong tournaments and birthday celebrations. (I assume I'm not missing much- but if I don't get invited to summer thanksgiving I'll be pretty upset). | ||
Revision as of 18:50, 19 June 2009
Donny
I have compiled a dictionary of over 200 chemicals determined by the EPA to be toxic linked to their respective Kegg IDs. I followed the tutorials for creating a webpage with django and have decided that this will be a good fit for our project. The dictionary of chemicals was made into an HTML drop down menu. In the upcoming weeks, I will make the html form linked to our SQL database so that it can be automatically updated as the EPA list is updated. I am working on making a simple layout for the page where the user can select a toxin from a list as well as select a desired product- the page will respond to these selections and indicate that it recognizes the choices made. Although this is an unimpressive feat, it will lay some foundation for our pages IO. I am also currently investigating how to improve the pathfinding algorithm that Palek found on the net. It is nowhere near efficient enough for our purposes. Ideally, this algorithm will be able to quickly scan the huge network of reactions and show every possible series of reactions that can go from input compound to output compound. Unfortunately, this is only the beginning because we will have to then determine our method of choosing which path will be the most realistic and also optimal in the sense of production.
In other news, I'm still not on the Illinois iGEM mailing list so I don't find out about things like team beer pong tournaments and birthday celebrations. (I assume I'm not missing much- but if I don't get invited to summer thanksgiving I'll be pretty upset).
