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Team:Alberta/Modeling/DualDeletionTest
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Rpgguardian (Talk | contribs) (New page: % Remember to run start.m; b=0.01; deltamodel = model; solution1 = optimizeCbModel(deltamodel, 'max', 'false', 'false'); for a=1:length(model.rxns); deltamodel = model; deltamodel = change...) |
Rpgguardian (Talk | contribs) |
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| - | % Remember to run start.m; | + | % Remember to run start.m; |
| - | b=0.01; | + | b=0.01; |
| - | deltamodel = model; | + | deltamodel = model; |
| - | solution1 = optimizeCbModel(deltamodel, 'max', 'false', 'false'); | + | solution1 = optimizeCbModel(deltamodel, 'max', 'false', 'false'); |
| - | for a=1:length(model.rxns); | + | for a=1:length(model.rxns); |
| - | deltamodel = model; | + | deltamodel = model; |
| - | deltamodel = changeRxnBounds(model, model.rxns(a), 0, 'b'); | + | deltamodel = changeRxnBounds(model, model.rxns(a), 0, 'b'); |
| - | deltasolution = optimizeCbModel(deltamodel); | + | deltasolution = optimizeCbModel(deltamodel); |
if deltasolution.f<b; | if deltasolution.f<b; | ||
v(a)=model.grRules(a); | v(a)=model.grRules(a); | ||
end | end | ||
| - | end | + | end |
| - | v = v'; % Copy v and model.rxns into a txt file to compare resulting data | + | v = v'; % Copy v and model.rxns into a txt file to compare resulting data |
Latest revision as of 20:38, 17 October 2009
% Remember to run start.m;
b=0.01;
deltamodel = model;
solution1 = optimizeCbModel(deltamodel, 'max', 'false', 'false');
for a=1:length(model.rxns);
deltamodel = model;
deltamodel = changeRxnBounds(model, model.rxns(a), 0, 'b');
deltasolution = optimizeCbModel(deltamodel);
if deltasolution.f<b;
v(a)=model.grRules(a);
end
end
v = v'; % Copy v and model.rxns into a txt file to compare resulting data
