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Team:Groningen/Modelling/Downloads
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(New page: {{Team:Groningen/Modelling/Header}} {{Category:Upload}} ==Downloads of Modelling raw data== ==Downloads of Biological raw data== *Promoter test of J61002-ArsR promoter, under induc...) |
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{{Team:Groningen/Modelling/Header}} | {{Team:Groningen/Modelling/Header}} | ||
| - | {{ | + | <div style="float:left" >{{linkedImage|GroningenPrevious.png|Team:Groningen/Modelling/Characterization}}</div> |
| - | + | <div title="Arsie Says UP TO ACCUMULATION" style="float:right" >{{linkedImage|Next.JPG|Team:Groningen/HumanPractice}}</div> | |
| - | + | ||
| + | <br> | ||
| + | ==Downloads of Modelling data/code== | ||
| + | *[http://code.google.com/p/igemgroningen/source/browse/trunk/buoyant/Raw%20Data/ All our raw data from papers] is available in SVN in a [http://code.google.com/p/igemgroningen/ Google Code project]. | ||
| + | *[http://igemgroningen.googlecode.com/svn/trunk/buoyant/Models/Heavy%20Metal%20Scavenger.xml An SBML version of our model.] (Not a complete match, because our model apparently needs a slightly too complex DAE.) | ||
| + | *[http://code.google.com/p/igemgroningen/source/browse/trunk/# A patch to Inkscape's measure.inx/.py to be able to measure in nanometers.] | ||
| + | *[http://igemgroningen.googlecode.com/svn/trunk/buoyant/Models/ Miscellaneous other stuff regarding our model.] (Early versions, Mathematica notebooks for computing certain parameters and so on.) | ||
==Downloads of Biological raw data== | ==Downloads of Biological raw data== | ||
*Promoter test of J61002-ArsR promoter, under induction of 100uM NaAsO2. | *Promoter test of J61002-ArsR promoter, under induction of 100uM NaAsO2. | ||
| - | + | For the raw data click [http://spreadsheets.google.com/ccc?key=0AiVK6TJREwindDlQOEJCdUpISTU4M2cweE5PT3p3MVE&hl=en here] (GoogleDocs spreadsheet)<br> | |
| + | The original Excel [https://2009.igem.org/Image:RPU_Calculations.zipsheet sheet] | ||
*Arsenite uptake assay, first data set | *Arsenite uptake assay, first data set | ||
| - | + | For the raw data click [http://spreadsheets.google.com/ccc?key=0AiVK6TJREwindE9OSjFpZzdGU2cxejU2S0lPaU80dlE&hl=en here] (GoogleDocs spreadsheet)<br>For the zip file click [https://2009.igem.org/Image:Berekeningen.zip here] | |
*Arsenite uptake assay, second data set | *Arsenite uptake assay, second data set | ||
| - | + | For the raw data click [http://spreadsheets.google.com/ccc?key=0AiVK6TJREwindFdsLURvM1RYeDBSZTJRb0tCVjByNGc&hl=en here] (GoogleDocs spreadsheet) | |
| - | + | *[http://igemgroningen.googlecode.com/svn/trunk/buoyant/Raw%20Data/Promoters/Fluorescence+OD.ods Promoter tests], using various constitutive and metal sensitive promoters. | |
| - | + | *[http://code.google.com/p/igemgroningen/source/browse/trunk/buoyant/Photos/ Photos] of our gas vesicles in test tubes | |
| - | + | and TEM pictures of our gas vesicles. | |
| - | + | ||
| - | + | ||
{{Team:Groningen/Footer}} | {{Team:Groningen/Footer}} | ||
Latest revision as of 20:44, 21 October 2009
[http://2009.igem.org/Team:Groningen http://2009.igem.org/wiki/images/f/f1/Igemhomelogo.png]
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- Modelling
- DetailedModel
- Characterization
- Downloads
[http://2009.igem.org/Team:Groningen/Modelling/Characterization http://2009.igem.org/wiki/images/1/1f/GroningenPrevious.png]
[http://2009.igem.org/Team:Groningen/HumanPractice http://2009.igem.org/wiki/images/d/dd/Next.JPG]
Downloads of Modelling data/code
- [http://code.google.com/p/igemgroningen/source/browse/trunk/buoyant/Raw%20Data/ All our raw data from papers] is available in SVN in a [http://code.google.com/p/igemgroningen/ Google Code project].
- [http://igemgroningen.googlecode.com/svn/trunk/buoyant/Models/Heavy%20Metal%20Scavenger.xml An SBML version of our model.] (Not a complete match, because our model apparently needs a slightly too complex DAE.)
- [http://code.google.com/p/igemgroningen/source/browse/trunk/# A patch to Inkscape's measure.inx/.py to be able to measure in nanometers.]
- [http://igemgroningen.googlecode.com/svn/trunk/buoyant/Models/ Miscellaneous other stuff regarding our model.] (Early versions, Mathematica notebooks for computing certain parameters and so on.)
Downloads of Biological raw data
- Promoter test of J61002-ArsR promoter, under induction of 100uM NaAsO2.
For the raw data click [http://spreadsheets.google.com/ccc?key=0AiVK6TJREwindDlQOEJCdUpISTU4M2cweE5PT3p3MVE&hl=en here] (GoogleDocs spreadsheet)
The original Excel sheet
- Arsenite uptake assay, first data set
For the raw data click [http://spreadsheets.google.com/ccc?key=0AiVK6TJREwindE9OSjFpZzdGU2cxejU2S0lPaU80dlE&hl=en here] (GoogleDocs spreadsheet)
For the zip file click here
- Arsenite uptake assay, second data set
For the raw data click [http://spreadsheets.google.com/ccc?key=0AiVK6TJREwindFdsLURvM1RYeDBSZTJRb0tCVjByNGc&hl=en here] (GoogleDocs spreadsheet)
- [http://igemgroningen.googlecode.com/svn/trunk/buoyant/Raw%20Data/Promoters/Fluorescence+OD.ods Promoter tests], using various constitutive and metal sensitive promoters.
- [http://code.google.com/p/igemgroningen/source/browse/trunk/buoyant/Photos/ Photos] of our gas vesicles in test tubes
and TEM pictures of our gas vesicles.
