Team:UCL London/Project/References

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References

Baranova, N., and H. Nikaido. (2002) The BaeSR two-component regulatory system activates transcription of the yegMNOB (mdtABCD) transporter gene cluster in Escherichia coli and increases its resistance to novobiocin and deoxycholate. J. Bacteriol. 184:4168–4176.

Bury-Moné, Stéphanie, Yanoura Nomane, Nancie Reymond, Romain Barbet, Eric Jacquet, Sandrine Imbeaud, Annick Jacq, and Philippe Bouloc (2009) Global Analysis of Extracytoplasmic Stress Signaling in Escherichia coli. PLoS Genet. 2009 September; 5(9): e1000651. Published online 2009 September 18. doi: 10.1371/journal.pgen.1000651. PMCID: PMC2731931

Costanzo, A., and S.E. Ades. (2006) Growth Phase-Dependent Regulation of the Extracytoplasmic Stress Factor, _E, by Guanosine 3_,5_-Bispyrophosphate (ppGpp). JOURNAL OF BACTERIOLOGY, July 2006, p. 4627–4634

DiGiuseppe, P. A., and T. J. Silhavy. (2003) Signal detection and target gene induction by the CpxRA two-component system. J. Bacteriol. 185:2432– 2440.

Hagenmaier, S., Stierhof, Y.D., and Henning, U. (1997) A new periplasmic protein of Escherichia coli which is synthesized in spheroplasts but not in intact cells. J Bacteriol 179: 2073–2076.

Hayden JD, Ades SE (2008) The extracytoplasmic stress factor, sigmaE, is required to maintain cell envelope integrity in Escherichia coli. PLoS ONE 3: e1573. doi:10.1371/journal.pone.0001573.

Miyadai, H., Tanaka-Masuda, K., Matsuyama, S., and Tokuda, H. (2004) Effects of Lipoprotein Overproduction on the Induction of DegP (HtrA) Involved in Quality Control in the Escherichia coli Periplasm*. THE JOURNAL OF BIOLOGICAL CHEMISTRY. Vol. 279, No. 38, Issue of September 17, pp. 39807–39813, 2004

Nishino, K., T. Honda, and A. Yamaguchi. (2005) Genome-wide analyses of Escherichia coli gene expression responsive to the BaeSR two-component regulatory system. J. Bacteriol. 187:1763–1772.

Nishino, Kunihiko, Eiji Nikaido, and Akihito Yamaguchi (2007) Regulation of Multidrug Efflux Systems Involved in Multidrug and Metal Resistance of Salmonella enterica Serovar Typhimurium. JOURNAL OF BACTERIOLOGY, Dec. 2007, p. 9066–9075

Price, N. L., and T. L. Raivio. (2009) Characterization of the Cpx Regulon in Escherichia coli Strain MC4100 JOURNAL OF BACTERIOLOGY, Mar. 2009, p. 1798–1815

Raffa, R. G., and T. L. Raivio. (2002) A third envelope stress signal transduction pathway in Escherichia coli. Mol. Microbiol. 45:1599–1611.

Raivio, T. L., M. W. Laird, J. C. Joly, and T. J. Silhavy. (2000) Tethering of CpxP to the inner membrane prevents spheroplast induction of the cpx envelope stress response. Mol. Microbiol. 37:1186–1197.

Rhodius, V.A., Suh, W.C., Nonaka, G., West, J., and Gross, C.A. (2005) Conserved and variable functions of the sigma(E) stress response in related genomes. PLoS Biol 4: e2.

Ruiz, N., and Silhavy, T.J (2005) Sensing external stress: watchdogs of the Escherichia coli cell envelope. Current Opinion in Microbiology 2005, 8:122–126

Snyder, Larry, and Wendy Champness. (2007) Molecular genetics of bacteria, 3rd ed. ASM Press. Washington, DC.

Wulf, P.D., McGuire, A.M., Liu, X., and Lin, E.C.C. (2002) Genome-wide profiling of promoter recognition by the twocomponent response regulator CpxR-P in Escherichia coli. J Biol Chem 277: 26652–26661.

Yamamoto, K., Ishihama, A. (2005) Transcriptional response of Escherichia coli to external copper. Mol. Microbiol. 56, 215–227.

Yamamoto K, Ogasawara H, Ishihama A (2008). "Involvement of multiple transcription factors for metal-induced spy gene expression in Escherichia coli." J Biotechnol 133(2):196-200. PMID: 17884222

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UCL London IGEM Wiki 2009

@@ Line 4: / Line 4: @@
 <div id="ucla1">
 === References===
 Baranova, N., and H. Nikaido. (2002) The BaeSR two-component regulatory
@@ Line 10: / Line 9: @@
 cluster in Escherichia coli and increases its resistance to novobiocin and
 deoxycholate. J. Bacteriol. 184:4168–4176.
-Bonnefoy V, DeMoss JA. (1992) "Identification of functional cis-acting sequences involved in regulation of narK gene expression in Escherichia coli." Mol Microbiol 1992;6(23);3595-602. PMID: 1474901
@@ Line 41: / Line 37: @@
-Kolesnikow T, Schröder I, Gunsalus RP. (1992) Regulation of narK gene expression in Escherichia coli in response to anaerobiosis, nitrate, iron, and molybdenum. J Bacteriol. 1992 Nov;174(22):7104-11.
+Miyadai, H., Tanaka-Masuda, K., Matsuyama, S., and Tokuda, H. (2004) Effects of Lipoprotein Overproduction on the Induction of DegP (HtrA) Involved in Quality Control in the Escherichia coli Periplasm*.
+THE JOURNAL OF BIOLOGICAL CHEMISTRY. Vol. 279, No. 38, Issue of September 17, pp. 39807–39813, 2004
-Nishino, K., T. Honda, and A. Yamaguchi. 2005. Genome-wide analyses of
+Nishino, K., T. Honda, and A. Yamaguchi. (2005) Genome-wide analyses of
 Escherichia coli gene expression responsive to the BaeSR two-component
 regulatory system. J. Bacteriol. 187:1763–1772.
@@ Line 57: / Line 54: @@
-Raffa, R. G., and T. L. Raivio. 2002. A third envelope stress signal transduction
+Raffa, R. G., and T. L. Raivio. (2002) A third envelope stress signal transduction
 pathway in Escherichia coli. Mol. Microbiol. 45:1599–1611.
-Raivio, T. L., M. W. Laird, J. C. Joly, and T. J. Silhavy. 2000. Tethering of
+Raivio, T. L., M. W. Laird, J. C. Joly, and T. J. Silhavy. (2000) Tethering of
 CpxP to the inner membrane prevents spheroplast induction of the cpx
 envelope stress response. Mol. Microbiol. 37:1186–1197.
@@ Line 72: / Line 69: @@
-Snyder, Larry., and Wendy Champness. (2007) Molecular genetics of bacteria, 3rd ed.
+Ruiz, N., and Silhavy, T.J (2005) Sensing external stress: watchdogs of the Escherichia coli cell envelope.
+Current Opinion in Microbiology 2005, 8:122–126
+Snyder, Larry, and Wendy Champness. (2007) Molecular genetics of bacteria, 3rd ed.
 ASM Press. Washington, DC.