August/20 August 2009
From 2009.igem.org
(Difference between revisions)
(New page: 1.<B>digestion and ligation</b><br> digestion with restriction enzyme<br> '''K204007''' , (K204003) <table border="1" Frame="box"> <tr><th colspan="2">Vector</th><th colspan="2">Insert</...) |
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<table border="1" Frame="box"> | <table border="1" Frame="box"> | ||
<tr><th colspan="2">Vector</th><th colspan="2">Insert</th></tr> | <tr><th colspan="2">Vector</th><th colspan="2">Insert</th></tr> | ||
- | <tr><td>RBS(1-2M)</td><td>10</td><td>cinR(1-14F)</td><td>12</td></tr> | + | <tr><td>RBS([http://partsregistry.org/wiki/index.php?title=Part:BBa_B0034 1-2M])</td><td>10</td><td>cinR([http://partsregistry.org/wiki/index.php?title=Part:BBa_C0077 1-14F])</td><td>12</td></tr> |
<tr><td>SpeI</td><td>1</td><td>XbaI</td><td>1</td><tr> | <tr><td>SpeI</td><td>1</td><td>XbaI</td><td>1</td><tr> | ||
<tr><td>PstI</td><td>1</td><td>PstI</td><td>1</td><tr> | <tr><td>PstI</td><td>1</td><td>PstI</td><td>1</td><tr> | ||
<tr><td> No.2 Buffer</td><td>2</td><td>No.2</td><td>2</td></tr> | <tr><td> No.2 Buffer</td><td>2</td><td>No.2</td><td>2</td></tr> | ||
- | <tr><td> | + | <tr><td>dH<sub>2</sub>O</td><td>6</td><td>dH<sub>2</sub>O</td><td>4</td></tr> |
<tr><td>total</td><td>20uL</td><td>total</td><td>20uL</td></tr> | <tr><td>total</td><td>20uL</td><td>total</td><td>20uL</td></tr> | ||
</table> | </table> | ||
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<table border="1" Frame="box"> | <table border="1" Frame="box"> | ||
<tr><th colspan="2">Vector</th><th colspan="2">Insert</th></tr> | <tr><th colspan="2">Vector</th><th colspan="2">Insert</th></tr> | ||
- | <tr><td>RBS(1-2M)</td><td>10</td><td>LuxI(2-8O)</td><td>12</td></tr> | + | <tr><td>RBS([http://partsregistry.org/wiki/index.php?title=Part:BBa_B0034 1-2M])</td><td>10</td><td>LuxI([http://partsregistry.org/wiki/index.php?title=Part:BBa_C0161 2-8O])</td><td>12</td></tr> |
<tr><td>SpeI</td><td>1</td><td>XbaI</td><td>1</td><tr> | <tr><td>SpeI</td><td>1</td><td>XbaI</td><td>1</td><tr> | ||
<tr><td>PstI</td><td>1</td><td>PstI</td><td>1</td><tr> | <tr><td>PstI</td><td>1</td><td>PstI</td><td>1</td><tr> | ||
<tr><td> No.2 Buffer</td><td>2</td><td>No.2</td><td>2</td></tr> | <tr><td> No.2 Buffer</td><td>2</td><td>No.2</td><td>2</td></tr> | ||
- | <tr><td> | + | <tr><td>dH<sub>2</sub>O</td><td>6</td><td>dH<sub>2</sub>O</td><td>4</td></tr> |
<tr><td>total</td><td>20uL</td><td>total</td><td>20uL</td></tr> | <tr><td>total</td><td>20uL</td><td>total</td><td>20uL</td></tr> | ||
</table> | </table> | ||
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↓<br> | ↓<br> | ||
gel electrophoresis<br> | gel electrophoresis<br> | ||
+ | [[Image:Osaka090819.jpg]]<br> | ||
+ | UP : 1-2M , 1-14F , 1-2M , 2-8O | ||
+ | DOWN : No.3-A,B,C,D , No.4-A,B,C,D , No.6-A,B,C,D , Vector | ||
gel cut<br> | gel cut<br> | ||
↓<br> | ↓<br> | ||
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⑥(RBS+cinI),K204006<br> | ⑥(RBS+cinI),K204006<br> | ||
⑥-A,B,C : OK | ⑥-A,B,C : OK | ||
+ | |||
+ | |||
+ | [https://2009.igem.org/Team:Osaka/NOTES back to NOTES] |
Latest revision as of 08:00, 12 October 2009
1.digestion and ligation
digestion with restriction enzyme
K204007 , (K204003)
Vector | Insert | ||
---|---|---|---|
RBS([http://partsregistry.org/wiki/index.php?title=Part:BBa_B0034 1-2M]) | 10 | cinR([http://partsregistry.org/wiki/index.php?title=Part:BBa_C0077 1-14F]) | 12 |
SpeI | 1 | XbaI | 1 |
PstI | 1 | PstI | 1 |
No.2 Buffer | 2 | No.2 | 2 |
dH2O | 6 | dH2O | 4 |
total | 20uL | total | 20uL |
K204008
Vector | Insert | ||
---|---|---|---|
RBS([http://partsregistry.org/wiki/index.php?title=Part:BBa_B0034 1-2M]) | 10 | LuxI([http://partsregistry.org/wiki/index.php?title=Part:BBa_C0161 2-8O]) | 12 |
SpeI | 1 | XbaI | 1 |
PstI | 1 | PstI | 1 |
No.2 Buffer | 2 | No.2 | 2 |
dH2O | 6 | dH2O | 4 |
total | 20uL | total | 20uL |
↓
37°C, 2hr
UP : 1-2M , 1-14F , 1-2M , 2-8O DOWN : No.3-A,B,C,D , No.4-A,B,C,D , No.6-A,B,C,D , Vector
gel cut
↓
purification by [QIAquick Nucleotide Removal Kit]
↓
ligation
ligation DNA 44 10* buffer 5 ligation 1 total 50uL ↓ 16°C overnight
2. rapid check
③(RBS+cinR),K204003
③-C,D : OK
④(RBS+LasR),K204004
④-A,B,C : OK
⑥(RBS+cinI),K204006
⑥-A,B,C : OK