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- | *Last Year Bug Fixing:
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- | **<s>New solution for reading gammaVals.txt (Old Problem: In Windows Vista semeed to be some reading problems)</s>
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- | **<s>Mathematic corrections in calcDistFromBoundary(Wrong Mathematics)</s>
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- | *BSim 3D:
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- | **Update Class BSimParticle r28 r51
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- | ***<s>Class parameters</s>
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- | ***<s>Constructor</s>
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- | ***<s>setPosition</s>
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- | ***<s>setCentrePos</s>
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- | ***<s>setDirection</s>
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- | ***<s>normalise3DVector</s>
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- | **Update Class BSimChemicalField r29 r35
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- | ***<s>Class parameters</s>
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- | ***<s>Constructor</s>
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- | ***<s>setAsLinear</s>
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- | ***<s>redraw</s>
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- | ***<s>updateField</s>
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- | ***Update Class BSimChemicalFieldThread
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- | ****<s>Class parameters</s>
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- | ****<s>Constructor</s>
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- | ****<s>run</s>
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- | ***<s>addChemical</s>
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- | ***<s>getConcentration</s>
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- | ***<s>getField</s>
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- | **Update Class BSImBacterium r30 r50 r55
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- | ***<s>iterateBacterium</s>
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- | ***iterateTumble
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- | ***<s>startNewPhase</s>
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- | ***<s>doRun</s>
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- | **Update Class BSImBacteriaCreate r31 r48
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- | ***<s>createBacteriaSet</s>
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- | ***<s>createBacterium</s>
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- | **Update Class BSimDeadBacterium r32
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- | ***<s>runLogic</s>
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- | **Update Class BSimBeadsCreate r33
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- | ***<s>createBeadSet</s>
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- | ***<s>createBead</s>
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- | **Update Class BSimChemicalFieldCreate r36
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- | ***<s>createChemicalField</s>
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- | **Update Class BSimCollisionPhysics r37 r39 r46
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- | ***<s>Class parameters</s>
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- | ***<s>updateProperties</s>
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- | ***Update Class BSimCollisionPhysicsThread
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- | ****<s>run</s>
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- | ****<s>distBetweenPoints</s>
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- | ****<s>resolveExternalForces</s>
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- | ****<s>linearMotion</s>
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- | ****<s>force2Velocity3D</s>
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- | **Update Class BSimParameters r38 r41 r42 r58
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- | ***<s>Class parameters</s>
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- | ***<s>createNewSolid[https://2009.igem.org/Team:BCCS-Bristol/Modeling/Mattia/box Box]BoundariesVec</s>
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- | ***<s>createNewWrap[https://2009.igem.org/Team:BCCS-Bristol/Modeling/Mattia/box Box]BoundariesVec</s>
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- | **Update Class BSimScene r40 r56
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- | ***<s>resetScene</s>
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- | ***<s>runAllUpdates</s>
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- | **<s>New Class BSimPlaneBoundaryCreate</s> r43 r 54
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- | **<s>New Class BSimSolidPlaneBoundary</s> r44 r49 r53
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- | **Update Class BSim[https://2009.igem.org/Team:BCCS-Bristol/Modeling/Mattia/parameter Parameters]Loader r47 r57
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- | ***<s>processLine</s>
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- | **<s>New Class BSimWrapPlaneBoundary</s> r52
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- | *BSim Population Dynamics:
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