Team:Sweden/Project

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{|style="color:#0000a0;background-color:#000000;" cellpadding="6" cellspacing="1" border="2" bordercolor="#fff" width="100%" align="center"
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!align="center"|[[Team:Sweden|Home]]
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!align="center"|[[Team:Sweden/Team|Our Team]]
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!align="center"|[[Team:Sweden/Project|Our Project]]
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background: #0000A0 url(https://static.igem.org/mediawiki/igem.org/4/48/Test_image.gif) repeat  fixed;
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!align="center"|[[Team:Sweden/Mathematical Modelling|Mathematical Modelling]]
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!align="center"|[[Team:Sweden/Logbook|Logbook]]
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!align="center"|[[Team:Sweden/Result|Result]]
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!align="center"|[[Team:Sweden/Parts|Parts]]
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!align="center"|[[Team:Sweden/Sponsors|Sponsors]]
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[[Image:JUST.jpg|center|970px]]
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{|style="background-color:#0000A0;" cellpadding="6" cellspacing="1" border="2" width="100%" align="center"
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!"align="center"|[[Team:Sweden|<font color="gold">Home</font>]]
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!align="center"|[[Team:Sweden/Team|<font color="gold">Team</font>]]
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!align="center"|[[Team:Sweden/Project|<font color="gold">Project</font>]]
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!align="center"|[[Team:Sweden/Mathematical Modelling|<font color="gold">Mathematical Modelling</font>]]
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!align="center"|[[Team:Sweden/Logbook|<font color="gold">Logbook</font>]]
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!align="center"|[[Team:Sweden/Result|<font color="gold">Result</font>]]
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<div style="text-align:justify">
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== Project ==
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== <font color="blue">Project</font> ==
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We want to implement this automaton in the cell. It is based on a few simple rules on how to parse a simple sentence like The little girl plays ball or Boys stroke the little dog. These simple rules are :
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<font color="blue">We want to implement an automaton in the E-Coli cell. It is based on a few simple grammer rules on how to parse a simple sentence like<br>'''The little girl plays ball''' or '''Boys stroke the little dog'''.<br>These simple rules are :
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<ul type="disc">
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<li>S  -->    NP VP
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<li>NP  -->  (det) (adj) N
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<li>VP -->  V (NP)
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</ul>
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<font color="blue">We target only the parts of speech (POS) tags which in these above grammars are:<br>
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<ul type="disc">
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<li> NP:Noun Phrase VP: Verb Phrase
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<li>(det:Determiner) (adj:adjective) N: Noun
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<li>VP:Verb Phrase V:Verb NP:Noun Phrase
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</ul>
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<font color="blue">This way the grammar can be implemented as a finite state automaton (FSA) and not as a push-down automaton.
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: S    à  NP VP
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<font color="blue">A finite state automation is a 5-tupel A = (Q, Σ, δ, s0, F), where Q is a finite set of states, Σ is the finite set of input symbols (alphabet), δ is the transition function, δ: Q × Σ -> Q, s0 is the start state and F is the set of final/accepting states.</font>
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: NP à (det adj) N
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: VP à V (NP)
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We target only the parts of speech (POS) tags because this way the grammar can be implemented as a finite state automaton (FSA) and not as a push-down automaton.
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==<font color="blue">Our Aim</font>==
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A finite state automaton is a 5-tupel A = (Q, Σ, δ, s0, F), where Q is a finite set of states, Σ is the finite set of input symbols (alphabet), δ is the transition function, δ: Q × Σ -> Q, s0 is the start state and F is the set of final/accepting states with .  
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<font color="blue">The sentence in our project is a string of different reagents which will be introduced to the cell one by one. As soon as a wrong input is detected the cell will light up red.  A sentence is finished by a stop reagent and then the cell will light up green. </font>
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The sentence is a string of different reagents which will be introduced to the cell one by one. As soon as a wrong input is detected the cell will light up red.  A sentence is finished by a stop reagent and then the cell will light up green.  
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----
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|bordercolor="gold" bgcolor="gold"|
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<font color="blue">The image represents an automaton that show how state transition occurs in a particular sentence parsing automaton</font>
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[[Image:teamsweden_state.png|580px|right|  ]]<br><br><br>
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|[[Image:teamsweden_state.png|500px|right]]
 
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''Tell us more about your project.  Give us background.  Use this is the abstract of your project.  Be descriptive but concise (1-2 paragraphs)''
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|align="center"|[[Team:Sweden | Team Example 2]]
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<!--- The Mission, Experiments --->
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!align="center"|[[Team:Sweden|Home]]
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!align="center"|[[Team:Sweden/Team|The Team]]
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!align="center"|[[Team:Sweden/Project|The Project]]
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!align="center"|[[Team:Sweden/Parts|Parts Submitted to the Registry]]
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!align="center"|[[Team:Sweden/Modeling|Modeling]]
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!align="center"|[[Team:Sweden/Notebook|Notebook]]
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(''Or you can choose different headings.  But you must have a team page, a project page, and a notebook page.'')
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== '''Overall project''' ==
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Your abstract
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== Project Details==
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=== Part 2 ===
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=== The Experiments ===
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=== Part 3 ===
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==<font color="blue">Safety issues</font>==
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\
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<font color="blue">We suggest our plasmid using a current Biobrick in the bank and no new bio bricks are suggested or built. So no safety issue is raised so far.</font>
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== Results ==
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|bordercolor="gold" bgcolor="gold"|
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[[Image:Igem_modified.gif|180px|center|  ]]

Latest revision as of 11:43, 21 October 2009

JUST.jpg
Home Team Project Mathematical Modelling Logbook Result Sponsors

Project

We want to implement an automaton in the E-Coli cell. It is based on a few simple grammer rules on how to parse a simple sentence like
The little girl plays ball or Boys stroke the little dog.
These simple rules are :

  • S --> NP VP
  • NP --> (det) (adj) N
  • VP --> V (NP)

We target only the parts of speech (POS) tags which in these above grammars are:

  • NP:Noun Phrase VP: Verb Phrase
  • (det:Determiner) (adj:adjective) N: Noun
  • VP:Verb Phrase V:Verb NP:Noun Phrase

This way the grammar can be implemented as a finite state automaton (FSA) and not as a push-down automaton.

A finite state automation is a 5-tupel A = (Q, Σ, δ, s0, F), where Q is a finite set of states, Σ is the finite set of input symbols (alphabet), δ is the transition function, δ: Q × Σ -> Q, s0 is the start state and F is the set of final/accepting states.

Our Aim

The sentence in our project is a string of different reagents which will be introduced to the cell one by one. As soon as a wrong input is detected the cell will light up red. A sentence is finished by a stop reagent and then the cell will light up green.

The image represents an automaton that show how state transition occurs in a particular sentence parsing automaton

Teamsweden state.png



Safety issues

\ We suggest our plasmid using a current Biobrick in the bank and no new bio bricks are suggested or built. So no safety issue is raised so far.

Igem modified.gif
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