Team:HKUST/Protocols/Western blotting

From 2009.igem.org

(Difference between revisions)
(New page: ===Western Blotting=== 1. Yeast transformed cells containing appropriate plasmids were grown in SCM with appropriate amino acids deleted and harvested at a cell density corresponding to an...)
 
(4 intermediate revisions not shown)
Line 1: Line 1:
-
===Western Blotting===
+
<html xmlns="http://www.w3.org/1999/xhtml">
-
1. Yeast transformed cells containing appropriate plasmids were grown in SCM with appropriate amino acids deleted and harvested at a cell density corresponding to an OD600 of a 10-fold dilution reaching 0.2.  
+
<head>
-
2. 2× Laemmli’s buffer (20% v/v glycerol, 0.1M Tris-HCl pH 6.9, 4% SDS, 0.2% bromophenol blue, 10% mercaptoethanol) was added and yeast crude extracts were prepared by glass bead lysis and separated on 10% SDS-PAGE.
+
<meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
-
3. The 10% resolving gel and the 5% stacking gel were cast according to the method described in Molecular Cloning (Sambrook et al., 1989).Separation was performed on a Mini Protean 3 gel and transblot system (Biorad). Proteins were stacked at 60-80 volts in the stacking gel and resolved at 120-150 volts in the resolving gel.  
+
<link href="http://igem2009hkust.fileave.com/wiki/template/12092009/style.css " rel="stylesheet" type="text/css" />
-
4. The proteins were then transferred onto a nitrocellulose membrane (pore size 0.45 μm, Schleicher &Schuell) in electrophoretic blotting system (C.B.S. Scientific) by applying a constant current of 0.5 mA for 1.5 hours.
+
<title>Salt and Soap template</title>
-
5. After transferring, the membrane was taken out and socked in Ponceau S solution (0.5% Ponceau S in 1% HAc) for 1 min. After rinsed with ddH2O and labeled with protein marker bands.
+
</head>
-
6. The membrane was destained with TBST buffer (10 mM Tris-HCl pH8.0, 150 mM NaCl, 0.05% v/v Tween-20) and blocked with 5% milk in TBST for 30 min.  
+
 
-
7. Then the membrane was incubated with the primary antibody (mouse monoclonal antibody against Flag) for 1 hour at room temperature followed by 3 × 15 min washing with TBST.  
+
<bodyxx>
-
8. The membrane was then incubated with secondary antibody (goat anti-mouse antibody conjugated with horseradish peroxidase) for 1 hour at room temperature followed by 3 × 15 min washing with TBST.  
+
<div id="containerxx">
-
9. After that, the membrane was incubated in SuperSignal chemiluminescence substrate (Pierce) for 5 min and exposed to light-sensitive films (Fuji).  In the end, the film was developed in a film-processing machine (Eastman Kodak).
+
<div id="headerxx">
 +
 +
</div>
 +
<div id="borderxx">
 +
<div id="mainxx">
 +
<div id="leftxx">
 +
<div id="menuxx">
 +
<ul>
 +
<li><a href="https://2009.igem.org/Team:HKUST">Home</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Team">Our Team</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Project">Project Description</a></li>
 +
 
 +
<b>
 +
<span style="color:green">
 +
<li>Main Parts</li>
 +
</span>
 +
</b>
 +
<li><a href="https://2009.igem.org/Team:HKUST/OdorantSensing">Odorant Sensing</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/AttractantProduction">Attractant Production</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/ToxinProduction">Toxin Production</a></li>
 +
 
 +
<b>
 +
<span style="color:green">
 +
<li>Resources</li>
 +
</span>
 +
</b>
 +
 
 +
<li><a href="https://2009.igem.org/Team:HKUST/Lab Notebook">Lab Notebook</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Parts">Parts Submitted </a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Protocols">Protocol List</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Resourses">Other Resources</a></li>
 +
</ul>
 +
</div>
 +
<div id="menubottom">
 +
<ul>
 +
<li><a href="https://2009.igem.org/Team:Gallery">Gallery</a></li>
 +
<li><a href="https://2009.igem.org/Team:Biosafety">Biosafety</a></li>
 +
<li><a href="https://2009.igem.org/Team:Acknowledgement">Acknowledgement</a></li>
 +
</ul>
 +
</div>
 +
</div>
 +
<div id="rightxx">
 +
<div class="contentlist"> <h3>a</h3>
 +
</div>
 +
<div class="contentxx">
 +
 
 +
<p>Western Blotting</p>
 +
 
 +
<p>Procedure: </p>
 +
1. Yeast transformed cells containing appropriate plasmids were grown in SCM with appropriate amino acids deleted and harvested at a cell density corresponding to an OD600 of a 10-fold dilution reaching 0.2. <br>
 +
2. 2× Laemmli’s buffer (20% v/v glycerol, 0.1M Tris-HCl pH 6.9, 4% SDS, 0.2% bromophenol blue, 10% mercaptoethanol) was added and yeast crude extracts were prepared by glass bead lysis and separated on 10% SDS-PAGE.<br>
 +
3. The 10% resolving gel and the 5% stacking gel were cast according to the method described in Molecular Cloning (Sambrook et al., 1989).Separation was performed on a Mini Protean 3 gel and transblot system (Biorad). Proteins were stacked at 60-80 volts in the stacking gel and resolved at 120-150 volts in the resolving gel. <br>
 +
4. The proteins were then transferred onto a nitrocellulose membrane (pore size 0.45 μm, Schleicher &Schuell) in electrophoretic blotting system (C.B.S. Scientific) by applying a constant current of 0.5 mA for 1.5 hours.<br>
 +
5. After transferring, the membrane was taken out and socked in Ponceau S solution (0.5% Ponceau S in 1% HAc) for 1 min. After rinsed with ddH2O and labeled with protein marker bands.<br>
 +
6. The membrane was destained with TBST buffer (10 mM Tris-HCl pH8.0, 150 mM NaCl, 0.05% v/v Tween-20) and blocked with 5% milk in TBST for 30 min. <br>
 +
7. Then the membrane was incubated with the primary antibody (mouse monoclonal antibody against Flag) for 1 hour at room temperature followed by 3 × 15 min washing with TBST. <br>
 +
8. The membrane was then incubated with secondary antibody (goat anti-mouse antibody conjugated with horseradish peroxidase) for 1 hour at room temperature followed by 3 × 15 min washing with TBST. <br>
 +
9. After that, the membrane was incubated in SuperSignal chemiluminescence substrate (Pierce) for 5 min and exposed to light-sensitive films (Fuji).  In the end, the film was developed in a film-processing machine (Eastman Kodak).<br> <br>
 +
 
 +
<ul>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Protocols/Agarose_gel" >Agarose gel preparation and gel
 +
electrophoresis</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Protocols/PCR">PCR (Taq, Vent)</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Protocols/PCR_cleanup">PCR product clean-up</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Protocols/Enzyme_digestion"> Enzyme digestion (vector, insert)</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Protocols/plasmid_extraction"> Plasmid DNA extraction</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Protocols/gel_cut"> Gel cutting</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Protocols/gel_extraction"> Gel extraction</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Protocols/Ethanol_precipitation"> Ethanol precipitation</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Protocols/Ligation"> Ligation</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Protocols/Transformation_to_Ecoli"> Transformation to E.coli</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Protocols/Transformation_to_yeast">Transformation to
 +
yeast</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Protocols/Cell_lysis"> Cell lysis</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Protocols/Yeast_genomic_DNA_extraction"> Yeast genomic DNA
 +
extraction</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Protocols/Western_blotting"> Western blotting</a></li>
 +
<li><a href="https://2009.igem.org/Team:HKUST/Protocols/GFP_testing"> GFP testing</a></li>
 +
 
 +
</ul>
 +
 +
</div>
 +
<div class="productxx">
 +
 +
<div class="clear"></div>
 +
</div>
 +
</div>
 +
<div class="clear"></div>
 +
</div>
 +
</div>
 +
<div id="footerxx">
 +
<div id="copyright">
 +
<span> iGEM 2009 <br /> </span>
 +
</div>
 +
<div id="payment"><img src="http://igem2009hkust.fileave.com/wiki/template/12092009/images/HKUSTLogo.jpg" alt="HKUST" /></div>
 +
</div>
 +
<div id="footerend"></div>
 +
</div>
 +
</bodyxx>
 +
</html>

Latest revision as of 09:57, 20 October 2009

Salt and Soap template

a

Western Blotting

Procedure:

1. Yeast transformed cells containing appropriate plasmids were grown in SCM with appropriate amino acids deleted and harvested at a cell density corresponding to an OD600 of a 10-fold dilution reaching 0.2.
2. 2× Laemmli’s buffer (20% v/v glycerol, 0.1M Tris-HCl pH 6.9, 4% SDS, 0.2% bromophenol blue, 10% mercaptoethanol) was added and yeast crude extracts were prepared by glass bead lysis and separated on 10% SDS-PAGE.
3. The 10% resolving gel and the 5% stacking gel were cast according to the method described in Molecular Cloning (Sambrook et al., 1989).Separation was performed on a Mini Protean 3 gel and transblot system (Biorad). Proteins were stacked at 60-80 volts in the stacking gel and resolved at 120-150 volts in the resolving gel.
4. The proteins were then transferred onto a nitrocellulose membrane (pore size 0.45 μm, Schleicher &Schuell) in electrophoretic blotting system (C.B.S. Scientific) by applying a constant current of 0.5 mA for 1.5 hours.
5. After transferring, the membrane was taken out and socked in Ponceau S solution (0.5% Ponceau S in 1% HAc) for 1 min. After rinsed with ddH2O and labeled with protein marker bands.
6. The membrane was destained with TBST buffer (10 mM Tris-HCl pH8.0, 150 mM NaCl, 0.05% v/v Tween-20) and blocked with 5% milk in TBST for 30 min.
7. Then the membrane was incubated with the primary antibody (mouse monoclonal antibody against Flag) for 1 hour at room temperature followed by 3 × 15 min washing with TBST.
8. The membrane was then incubated with secondary antibody (goat anti-mouse antibody conjugated with horseradish peroxidase) for 1 hour at room temperature followed by 3 × 15 min washing with TBST.
9. After that, the membrane was incubated in SuperSignal chemiluminescence substrate (Pierce) for 5 min and exposed to light-sensitive films (Fuji). In the end, the film was developed in a film-processing machine (Eastman Kodak).

HKUST