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Minnesota/13 July 2009
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|'''[[Minnesota/10 July 2009|Go to Previous Day (July 10)]]'''|| width=158|'''[[Minnesota/14 July 2009|Go to Next Day (July 14)]]''' | |'''[[Minnesota/10 July 2009|Go to Previous Day (July 10)]]'''|| width=158|'''[[Minnesota/14 July 2009|Go to Next Day (July 14)]]''' | ||
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| - | <br> | + | '''Patrick'''<br> |
| + | Up until now I had simply put an initial amount of aTc into the system and let the system run. This was a fairly good representation of the system all things considered. But there is an alternate way to model this: By having two aTc species. One is outside (I called it aTcO) and then a 45th reaction (aTcO --> aTc) is added to let the aTc molecules outside the cell move into the cell.<br> | ||
| + | |||
| + | I quickly created a new base model, '''mad_ttn_base2''', to make sure the two situations were roughly equivalent. Since it is assumed that aTc moves across the membrane more or less instantaneously, this should be the case.<br> | ||
| + | |||
| + | '''Ben'''<br> | ||
[[Image:Tnnatcvariesleaky27.jpg|480px]][[Image:Tnnexperiment.jpg|480px]]<br> | [[Image:Tnnatcvariesleaky27.jpg|480px]][[Image:Tnnexperiment.jpg|480px]]<br> | ||
Latest revision as of 19:29, 30 July 2009
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Patrick
Up until now I had simply put an initial amount of aTc into the system and let the system run. This was a fairly good representation of the system all things considered. But there is an alternate way to model this: By having two aTc species. One is outside (I called it aTcO) and then a 45th reaction (aTcO --> aTc) is added to let the aTc molecules outside the cell move into the cell.
I quickly created a new base model, mad_ttn_base2, to make sure the two situations were roughly equivalent. Since it is assumed that aTc moves across the membrane more or less instantaneously, this should be the case.
Ben
