WTM

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(→Wild Type Molecular Model)
(→Wild Type Molecular Model)
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</center>
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Chemical Reactions
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</head>
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<body link="#0000d4" vlink="#993366">
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<table border=1 cellpadding=0 cellspacing=0 width=961 style='border-collapse:
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collapse;table-layout:fixed'>
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<col width=209>
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<col width=752>
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<tr height=13>
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  <td height=13 width=209>Name</td>
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  <td width=752>Reaction</td>
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</tr>
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<tr height=13>
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  <td height=13>PoliI transcription</td>
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  <td>DNAclassI -&gt; DNAclassI + PolycistronicmRNAI</td>
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</tr>
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<tr height=13>
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  <td height=13>PoliIII transcription</td>
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  <td>DNAClass2b + T7RNApol -&gt; DNAClass2b + PolycistronicmRNAIII + T7RNApol</td>
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</tr>
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<tr height=13>
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  <td height=13>PoliIV transcription</td>
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  <td>DNAClass3a + T7RNApol -&gt; DNAClass3a + PolycistronicmRNAIV + T7RNApol</td>
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</tr>
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<tr height=13>
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  <td height=13>PoliV transcription</td>
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  <td>DNAClass3a + T7RNApol -&gt; DNAClass3a + PolycistronicmRNAV + T7RNApol</td>
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</tr>
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<tr height=13>
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  <td height=13>PoliVI transcription</td>
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  <td>DNAClass3a + T7RNApol -&gt; DNAClass3a + PolycistronicmRNAVI + T7RNApol</td>
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</tr>
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<tr height=13>
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  <td height=13>PoliVII transcription</td>
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  <td>DNAClass3b + T7RNApol -&gt; DNAClass3b + PolycistronicmRNAVII + T7RNApol</td>
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</tr>
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<tr height=13>
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  <td height=13>PoliVIII transcription</td>
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  <td>DNAClass3c + T7RNApol -&gt; DNAClass3c + PolycistronicmRNAVIII + T7RNApol</td>
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</tr>
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<tr height=13>
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  <td height=13>PoliIX transcription</td>
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  <td>DNAClass3c + T7RNApol -&gt; DNAClass3c + T7RNApol + PolycistronicmRNAIX</td>
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</tr>
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<tr height=13>
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  <td height=13>T7RNApol translation</td>
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  <td>PolycistronicmRNAI -&gt; PolycistronicmRNAI + T7RNApol</td>
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</tr>
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<tr height=13>
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  <td height=13>T7DNApol translation</td>
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  <td>PolycistronicmRNAIII -&gt; PolycistronicmRNAIII + T7DNApol</td>
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</tr>
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<tr height=13>
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  <td height=13>HeadTail translation</td>
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  <td>PolycistronicmRNAIV -&gt; PolycistronicmRNAIV + HeadTail</td>
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</tr>
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<tr height=13>
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  <td height=13>CapsidAssembly_IV translation</td>
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  <td>PolycistronicmRNAIV -&gt; PolycistronicmRNAIV + CapsidAssembly</td>
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</tr>
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<tr height=13>
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  <td height=13>ABproteins_IV translation</td>
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  <td>PolycistronicmRNAIV -&gt; PolycistronicmRNAIV + ABProteins</td>
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</tr>
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<tr height=13>
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  <td height=13>CapsidAssembly_V translation</td>
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  <td>PolycistronicmRNAV -&gt; PolycistronicmRNAV + CapsidAssembly</td>
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</tr>
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<tr height=13>
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  <td height=13>ABproteins_V translation</td>
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  <td>PolycistronicmRNAV -&gt; PolycistronicmRNAV + ABProteins</td>
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</tr>
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<tr height=13>
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  <td height=13>ABproteins_VI translation</td>
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  <td>PolycistronicmRNAVI -&gt; PolycistronicmRNAVI + ABProteins</td>
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</tr>
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<tr height=13>
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  <td height=13>ABproteins_VII translation</td>
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  <td>PolycistronicmRNAVII -&gt; PolycistronicmRNAVII + ABProteins</td>
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</tr>
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<tr height=13>
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  <td height=13>TailA_VII translation</td>
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  <td>PolycistronicmRNAVII -&gt; PolycistronicmRNAVII + TailA</td>
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</tr>
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<tr height=13>
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  <td height=13>TailB_VII translation</td>
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  <td>PolycistronicmRNAVII -&gt; PolycistronicmRNAVII + TailB</td>
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</tr>
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<tr height=13>
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  <td height=13>CoreA translation</td>
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  <td>PolycistronicmRNAVIII -&gt; PolycistronicmRNAVIII + CoreA</td>
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</tr>
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<tr height=13>
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  <td height=13>CoreB translation</td>
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  <td>PolycistronicmRNAVIII -&gt; PolycistronicmRNAVIII + CoreB</td>
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</tr>
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<tr height=13>
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  <td height=13>CoreC translation</td>
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  <td>PolycistronicmRNAVIII -&gt; PolycistronicmRNAVIII + CoreC</td>
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</tr>
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<tr height=13>
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  <td height=13>CoreD translation</td>
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  <td>PolycistronicmRNAVIII -&gt; PolycistronicmRNAVIII + CoreD</td>
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</tr>
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<tr height=13>
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  <td height=13>TailFiber_VIII translation</td>
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  <td>PolycistronicmRNAVIII -&gt; PolycistronicmRNAVIII + TailFiber</td>
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</tr>
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<tr height=13>
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  <td height=13>Procapsid formation</td>
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  <td>417 ABProteins -&gt; Procapsid</td>
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</tr>
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<tr height=13>
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  <td height=13>DNA packaging/Final Assembly</td>
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  <td>12 HeadTail + 137 CapsidAssembly + Procapsid + 18 TailA + 6 TailB + 33
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  CoreA + 18 CoreB + 12 CoreC + 3 CoreD + 18 TailFiber + T7DNA -&gt; T7</td>
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</tr>
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<tr height=13>
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  <td height=13>TailFiber_IX translation</td>
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  <td>PolycistronicmRNAIX -&gt; PolycistronicmRNAIX + TailFiber</td>
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</tr>
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<tr height=13>
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  <td height=13>PolycistronicmRNAIX degradation</td>
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  <td>PolycistronicmRNAIX -&gt; null</td>
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</tr>
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<tr height=13>
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  <td height=13>Phage Replication</td>
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  <td>T7DNApol -&gt; T7DNApol + T7DNA</td>
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</tr>
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<tr height=13>
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  <td height=13>PolycistronicmRNAI degradation</td>
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  <td>PolycistronicmRNAI -&gt; null</td>
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</tr>
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<tr height=13>
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  <td height=13>PolycistronicmRNAIII degradation</td>
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  <td>PolycistronicmRNAIII -&gt; null</td>
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</tr>
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<tr height=13>
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  <td height=13>PolycistronicmRNAIV degradation</td>
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  <td>PolycistronicmRNAIV -&gt; null</td>
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</tr>
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<tr height=13>
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  <td height=13>PolycistronicmRNAV degradation</td>
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  <td>PolycistronicmRNAV -&gt; null</td>
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</tr>
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<tr height=13>
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  <td height=13>PolycistronicmRNAVI degradation</td>
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  <td>PolycistronicmRNAVI -&gt; null</td>
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</tr>
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<tr height=13>
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  <td height=13>PolycistronicmRNAVII degradation</td>
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  <td>PolycistronicmRNAVII -&gt; null</td>
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</tr>
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<tr height=13>
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  <td height=13>PolycistronicmRNAVIII degradation</td>
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  <td>PolycistronicmRNAVIII -&gt; null</td>
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</tr>
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</table>
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</body>
</html>
</html>

Revision as of 22:15, 15 October 2009

Wild Type Molecular Model

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Chemical Reactions
Name Reaction
PoliI transcription DNAclassI -> DNAclassI + PolycistronicmRNAI
PoliIII transcription DNAClass2b + T7RNApol -> DNAClass2b + PolycistronicmRNAIII + T7RNApol
PoliIV transcription DNAClass3a + T7RNApol -> DNAClass3a + PolycistronicmRNAIV + T7RNApol
PoliV transcription DNAClass3a + T7RNApol -> DNAClass3a + PolycistronicmRNAV + T7RNApol
PoliVI transcription DNAClass3a + T7RNApol -> DNAClass3a + PolycistronicmRNAVI + T7RNApol
PoliVII transcription DNAClass3b + T7RNApol -> DNAClass3b + PolycistronicmRNAVII + T7RNApol
PoliVIII transcription DNAClass3c + T7RNApol -> DNAClass3c + PolycistronicmRNAVIII + T7RNApol
PoliIX transcription DNAClass3c + T7RNApol -> DNAClass3c + T7RNApol + PolycistronicmRNAIX
T7RNApol translation PolycistronicmRNAI -> PolycistronicmRNAI + T7RNApol
T7DNApol translation PolycistronicmRNAIII -> PolycistronicmRNAIII + T7DNApol
HeadTail translation PolycistronicmRNAIV -> PolycistronicmRNAIV + HeadTail
CapsidAssembly_IV translation PolycistronicmRNAIV -> PolycistronicmRNAIV + CapsidAssembly
ABproteins_IV translation PolycistronicmRNAIV -> PolycistronicmRNAIV + ABProteins
CapsidAssembly_V translation PolycistronicmRNAV -> PolycistronicmRNAV + CapsidAssembly
ABproteins_V translation PolycistronicmRNAV -> PolycistronicmRNAV + ABProteins
ABproteins_VI translation PolycistronicmRNAVI -> PolycistronicmRNAVI + ABProteins
ABproteins_VII translation PolycistronicmRNAVII -> PolycistronicmRNAVII + ABProteins
TailA_VII translation PolycistronicmRNAVII -> PolycistronicmRNAVII + TailA
TailB_VII translation PolycistronicmRNAVII -> PolycistronicmRNAVII + TailB
CoreA translation PolycistronicmRNAVIII -> PolycistronicmRNAVIII + CoreA
CoreB translation PolycistronicmRNAVIII -> PolycistronicmRNAVIII + CoreB
CoreC translation PolycistronicmRNAVIII -> PolycistronicmRNAVIII + CoreC
CoreD translation PolycistronicmRNAVIII -> PolycistronicmRNAVIII + CoreD
TailFiber_VIII translation PolycistronicmRNAVIII -> PolycistronicmRNAVIII + TailFiber
Procapsid formation 417 ABProteins -> Procapsid
DNA packaging/Final Assembly 12 HeadTail + 137 CapsidAssembly + Procapsid + 18 TailA + 6 TailB + 33 CoreA + 18 CoreB + 12 CoreC + 3 CoreD + 18 TailFiber + T7DNA -> T7
TailFiber_IX translation PolycistronicmRNAIX -> PolycistronicmRNAIX + TailFiber
PolycistronicmRNAIX degradation PolycistronicmRNAIX -> null
Phage Replication T7DNApol -> T7DNApol + T7DNA
PolycistronicmRNAI degradation PolycistronicmRNAI -> null
PolycistronicmRNAIII degradation PolycistronicmRNAIII -> null
PolycistronicmRNAIV degradation PolycistronicmRNAIV -> null
PolycistronicmRNAV degradation PolycistronicmRNAV -> null
PolycistronicmRNAVI degradation PolycistronicmRNAVI -> null
PolycistronicmRNAVII degradation PolycistronicmRNAVII -> null
PolycistronicmRNAVIII degradation PolycistronicmRNAVIII -> null

Retrieved from "http://2009.igem.org/WTM"