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Team:Alberta/Project/Modeling/start
From 2009.igem.org
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | % start script | + | % start script |
| - | changeCobraSolver('glpk'); %can use any solver that is supported | + | changeCobraSolver('glpk'); %can use any solver that is supported |
| - | model = readCbModel() %('Ec_iAF1260_flux1.xml') | + | model = readCbModel() %('Ec_iAF1260_flux1.xml') |
| - | solution1 = optimizeCbModel(model, 'max', 'false', 'false'); | + | solution1 = optimizeCbModel(model, 'max', 'false', 'false'); |
| - | essgenes=cell(1) | + | essgenes=cell(1) |
| - | InitialGrowthRate = solution1.f | + | InitialGrowthRate = solution1.f |
Revision as of 00:23, 18 October 2009
% start script
changeCobraSolver('glpk'); %can use any solver that is supported
model = readCbModel() %('Ec_iAF1260_flux1.xml')
solution1 = optimizeCbModel(model, 'max', 'false', 'false');
essgenes=cell(1)
InitialGrowthRate = solution1.f
