August/6 August 2009

From 2009.igem.org

(Difference between revisions)
(To do in lab)
(Design genetic circuits)
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We take notice of signal molecules. So I put them in order in the chart below.<br/>
We take notice of signal molecules. So I put them in order in the chart below.<br/>
                                                                                                                                 *Inducer ⇒(synthesize)  signal moleculer ⇒(synthesize)  Receiver  
                                                                                                                                 *Inducer ⇒(synthesize)  signal moleculer ⇒(synthesize)  Receiver  
-
  * LuxI ⇒     3OC6HSL      ⇒ LuxR
+
  * LuxI ⇒     3OC6HSL      ⇒ LuxR → positive regulation
-
  *  LasI ⇒  AI-1(3OC12HSL)  ⇒ LasR
+
  *  LasI ⇒  AI-1(3OC12HSL)  ⇒ LasR → positive regulation
-
  * CinI  ⇒   3OH,C14:1-HSl   ⇒ CinR
+
  * CinI  ⇒   3OH,C14:1-HSl   ⇒ CinR →positive regulation
-
  * RhlI ⇒  AI-1(C4HSL)     ⇒ RhlR  
+
  * RhlI ⇒  AI-1(C4HSL)     ⇒ RhlR  → positive regulation
  * (exception)agrD synthesize AIP with agrB.AIp synthesize agrC . AgrA which is synthesized by agrC activate promoter.
  * (exception)agrD synthesize AIP with agrB.AIp synthesize agrC . AgrA which is synthesized by agrC activate promoter.

Revision as of 23:58, 6 August 2009

Contents

Morning Meeting

To do in lab

1. Transform & Selection

  • Medium buildng
    • LB
    • LB Amp+
    • LB Kan+
  • Transformation
    • About 16 kinds of parts
   We transform these following 14 parts today.
      B0015 Plate 1 23L    S03878 Plate2 16M
      C0179 Pate 2 8M     C0070 Plate2  12H
     F1610 Plate2 24G    B0034 Plate1 2M
      I0462 Plate1 8O    C0078 Plate1 14D
     C0077 Plate1 14A   I1466 Plate1 23J 
     

2. Breeding

3. Refinement

To bring

  • Timer
  • Pen
  • Slipper

Design genetic circuits

We take notice of signal molecules. So I put them in order in the chart below.
  *Inducer ⇒(synthesize) signal moleculer ⇒(synthesize) Receiver

* LuxI ⇒     3OC6HSL       ⇒ LuxR  → positive regulation
*  LasI ⇒  AI-1(3OC12HSL)  ⇒ LasR → positive regulation
* CinI  ⇒   3OH,C14:1-HSl   ⇒ CinR →positive regulation
* RhlI ⇒  AI-1(C4HSL)     ⇒ RhlR  → positive regulation
* (exception)agrD synthesize AIP with agrB.AIp synthesize agrC . AgrA which is synthesized by agrC activate promoter.
 From now on,We have to do what I mention below
 1.Search other cell-cell comunication system
 2.Check systems component completely
 3.Create new systems or reinforce cell funcution with additional ideas
 4.Search the effect of cross talk 

          written by Tadasi Nakamura