August/16 August 2009

From 2009.igem.org

(Difference between revisions)
Line 1: Line 1:
-
=parts planning=
+
'''parts planning'''
-
 
+
=sensor=
  '''signal sensor<br>'''  
  '''signal sensor<br>'''  
  [[Image:Planning_osaka.PNG]]<br>
  [[Image:Planning_osaka.PNG]]<br>
-
==1.3O6HSL  P(tetR)+luxI<br>==
+
=='''3O6HSL'''   P(tetR)+luxI<br>==
-
1.1.RBS + luxI<br>
+
1.RBS + luxI<br>
<table border="1" Frame="box">
<table border="1" Frame="box">
<tr><td>Vector</td><td>Insert</td></tr>
<tr><td>Vector</td><td>Insert</td></tr>
Line 15: Line 15:
-
1.2.RBS+ luxI + terminator<br>
+
2.RBS+ luxI + terminator<br>
<table border="1" Frame="box">
<table border="1" Frame="box">
<tr><td>Vector</td><td>Insert</td></tr>
<tr><td>Vector</td><td>Insert</td></tr>
<tr><td>double terminator</td><td>RBS+luxI</td></tr>
<tr><td>double terminator</td><td>RBS+luxI</td></tr>
-
<tr><td>[http://partsregistry.org/Part:BBa_B0034 BBa_B0034]</td><td> </td></tr>
+
<tr><td>[http://partsregistry.org/Part:BBa_B0015 BBa_B0015]</td><td> </td></tr>
<tr><td>pSB1AK3</td><td></td></tr>
<tr><td>pSB1AK3</td><td></td></tr>
</table>
</table>
-
1.3.P(tetR)+RBS+ luxI + terminator<br>
+
3.P(tetR)+RBS+ luxI + terminator<br>
<table border="1" Frame="box">
<table border="1" Frame="box">
<tr><td>Vector</td><td>Insert</td></tr>
<tr><td>Vector</td><td>Insert</td></tr>
<tr><td>BBa_R0040</td><td>RBS+luxI+terminator</td></tr>
<tr><td>BBa_R0040</td><td>RBS+luxI+terminator</td></tr>
 +
<tr><td>[http://partsregistry.org/Part:BBa_R0040 BBa_R0040]</td><td> </td></tr>
<tr><td>pSB1A2</td><td> </td></tr>
<tr><td>pSB1A2</td><td> </td></tr>
</table>
</table>
-
==2.C4HSL  P(tetR)+rhlI<br>==
+
=='''C4HSL'''   P(tetR)+rhlI<br>==
-
2.1.RBS + rhII
+
1.RBS + rhII
<table border="1" Frame="box">
<table border="1" Frame="box">
<tr><td>Vector</td><td>Insert</td></tr>
<tr><td>Vector</td><td>Insert</td></tr>
Line 42: Line 43:
-
2.2.RBS + rhII + terminator
+
2.RBS + rhII + terminator
<table border="1" Frame="box">
<table border="1" Frame="box">
<tr><td>Vector</td><td>Insert</td></tr>
<tr><td>Vector</td><td>Insert</td></tr>
<tr><td>double terminator</td><td>RBS + rhII </td></tr>
<tr><td>double terminator</td><td>RBS + rhII </td></tr>
-
<tr><td>[http://partsregistry.org/Part:BBa_B0034 BBa_B0034]</td><td> </td></tr>
+
<tr><td>[http://partsregistry.org/Part:BBa_B0015 BBa_B0015]</td><td> </td></tr>
<tr><td>pSB1AK3</td><td></td></tr>
<tr><td>pSB1AK3</td><td></td></tr>
</table>
</table>
-
2.3.P(tetR) + RBS + rhlI + terminator<br>
+
3.P(tetR) + RBS + rhlI + terminator<br>
<table border="1" Frame="box">
<table border="1" Frame="box">
<tr><td>Vector</td><td>Insert</td></tr>
<tr><td>Vector</td><td>Insert</td></tr>
Line 60: Line 61:
-
3.AI-1<br>
+
=='''AI-1'''  P(tetR)+lasI==
-
P(tetR)+lasI<br>
+
 +
1.RBS + LasI
 +
<table border="1" Frame="box">
 +
<tr><td>Vector</td><td>Insert</td></tr>
 +
<tr><td>RBS</td><td>LasI</td></tr>
 +
<tr><td>pSB1A2</td><td> </td></tr>
 +
</table>
-
4.3OH,C14:1-HSL<br>
+
2.RBS + LasI +terminator
-
P(tetR)+cinI<br>
+
<table border="1" Frame="box">
 +
<tr><td>Vector</td><td>Insert</td></tr>
 +
<tr><td>double terminator</td><td>RBS + LasI +terminator</td></tr>
 +
<tr><td>[http://partsregistry.org/Part:BBa_B0015 BBa_B0015]</td><td> </td></tr>
 +
<tr><td>pSB1AK3</td><td></td></tr>
 +
</table>
 +
 +
3.P(tetR) + RBS + LasI +terminator
 +
<table border="1" Frame="box">
 +
<tr><td>Vector</td><td>Insert</td></tr>
 +
<tr><td>p(tetR)</td><td>RBS + LasI +terminator</td></tr>
 +
<tr><td>[http://partsregistry.org/Part:BBa_R0040 BBa_R0040]</td><td> </td></tr>
 +
<tr><td>pSB1A2</td><td></td></tr>
 +
</table>
 +
 +
 +
 +
=='''3OH,C14:1-HSL'''  P(tetR)+cinI<br>==
 +
 +
1. RBS + cinI
 +
<table border="1" Frame="box">
 +
<tr><td>Vector</td><td>Insert</td></tr>
 +
<tr><td>RBS</td><td>cinI</td></tr>
 +
<tr><td>pSB1A2</td><td> </td></tr>
 +
</table>
 +
 +
 +
2.RBS + cinI +terminator
 +
<table border="1" Frame="box">
 +
<tr><td>Vector</td><td>Insert</td></tr>
 +
<tr><td>double terminator</td><td>RBS + cinI +terminator</td></tr>
 +
<tr><td>[http://partsregistry.org/Part:BBa_B0015 BBa_B0015]</td><td> </td></tr>
 +
<tr><td>pSB1AK3</td><td></td></tr>
 +
</table>
 +
 +
 +
3.P(tetR) + RBS + cinI +terminator
 +
<table border="1" Frame="box">
 +
<tr><td>Vector</td><td>Insert</td></tr>
 +
<tr><td>p(tetR)</td><td>RBS + cinI +terminator</td></tr>
 +
<tr><td>[http://partsregistry.org/Part:BBa_R0040 BBa_R0040]</td><td> </td></tr>
 +
<tr><td>pSB1A2</td><td></td></tr>
 +
</table>
 +
=receiver=
  '''signal receiver<br>'''  
  '''signal receiver<br>'''  
  [[Image:Planning osaka receiver.PNG]]<br>
  [[Image:Planning osaka receiver.PNG]]<br>
-
1.3O6HSL<br>
+
=='''3O6HSL'''  luxpL+luxR+luxpR==
-
luxpL+luxR+luxpR<br>
+
[http://partsregistry.org/Part:BBa_F2621 BBa_F2621](1158bp)<br>
 +
pSB1A2<br>
 +
=='''C4HSL'''  p(tetR) + rhlR  +  RhlR+C4==
 +
1.RhlR+p(Rhl)
 +
<table border="1" Frame="box">
 +
<tr><td>Vector</td><td>Insert</td></tr>
 +
<tr><td>RhlR</td><td>p(RhlR)</td></tr>
 +
<tr><td>[http://partsregistry.org/Part:BBa_I1466 BBa_I1466]</td><td>[http://partsregistry.org/Part:BBa_I14017 BBa_I14017]</td></tr>
 +
<tr><td>pSB2K3</td><td></td></tr>
 +
</table>
-
2.C4HSL<br>
+
2.p(tetR)+RhlR+p(Rhl)
-
p(tetR) + rhlR  +  RhlR+C4<br>
+
<table border="1" Frame="box">
 +
<tr><td>Vector</td><td>Insert</td></tr>
 +
<tr><td>p(tetR)</td><td>RhlR+p(Rhl)</td></tr>
 +
<tr><td>[http://partsregistry.org/Part:BBa_R0040 BBa_R0040]</td><td> </td></tr>
 +
<tr><td>pSB1A2</td><td></td></tr>
 +
</table>
 +
=='''AI-1'''  p(tetR) + lasR +  LasR+pAI==
 +
1. RBS + lasR
 +
<table border="1" Frame="box">
 +
<tr><td>Vector</td><td>Insert</td></tr>
 +
<tr><td>RBS</td><td>lasR</td></tr>
 +
<tr><td>pSB1A2</td><td> </td></tr>
 +
</table>
-
3.AI-1<br>
 
-
p(tetR) + lasR +  LasR+pAI
 
 +
2.RBS + lasR +terminator
 +
<table border="1" Frame="box">
 +
<tr><td>Vector</td><td>Insert</td></tr>
 +
<tr><td>double terminator</td><td>RBS + lasR +terminator</td></tr>
 +
<tr><td>[http://partsregistry.org/Part:BBa_B0015 BBa_B0015]</td><td> </td></tr>
 +
<tr><td>pSB1AK3</td><td></td></tr>
 +
</table>
-
4.3OH,C14:1-HSL<br>
+
3.P(tetR) + RBS + lasR +terminator
-
p(tetR) + cinR + cinR
+
<table border="1" Frame="box">
 +
<tr><td>Vector</td><td>Insert</td></tr>
 +
<tr><td>p(tetR)</td><td>RBS + lasR +terminator</td></tr>
 +
<tr><td>[http://partsregistry.org/Part:BBa_R0040 BBa_R0040]</td><td> </td></tr>
 +
<tr><td>pSB1A2</td><td></td></tr>
 +
</table>
 +
 
 +
 
 +
4.P(tetR) + RBS + lasR +terminator +lasR+pAI
 +
<table border="1" Frame="box">
 +
<tr><td>Vector</td><td>Insert</td></tr>
 +
<tr><td>lasR+pAI</td><td>P(tetR) + RBS + lasR +terminator</td></tr>
 +
<tr><td>[http://partsregistry.org/Part:BBa_R0079 BBa_R0079]</td><td> </td></tr>
 +
<tr><td>pSB1A2</td><td></td></tr>
 +
</table>
 +
 
 +
 
 +
 
 +
=='''3OH,C14:1-HSL'''  p(tetR) + cinR + cinR==
 +
1. RBS + cinR
 +
<table border="1" Frame="box">
 +
<tr><td>Vector</td><td>Insert</td></tr>
 +
<tr><td>RBS</td><td>cinR</td></tr>
 +
<tr><td>pSB1A2</td><td> </td></tr>
 +
</table>
 +
 
 +
 
 +
2.RBS + cinR +terminator
 +
<table border="1" Frame="box">
 +
<tr><td>Vector</td><td>Insert</td></tr>
 +
<tr><td>double terminator</td><td>RBS + cinR +terminator</td></tr>
 +
<tr><td>[http://partsregistry.org/Part:BBa_B0015 BBa_B0015]</td><td> </td></tr>
 +
<tr><td>pSB1AK3</td><td></td></tr>
 +
</table>
 +
 
 +
 
 +
3.P(tetR) + RBS + cinR +terminator
 +
<table border="1" Frame="box">
 +
<tr><td>Vector</td><td>Insert</td></tr>
 +
<tr><td>p(tetR)</td><td>RBS + cinR +terminator</td></tr>
 +
<tr><td>[http://partsregistry.org/Part:BBa_R0040 BBa_R0040]</td><td> </td></tr>
 +
<tr><td>pSB1A2</td><td></td></tr>
 +
</table>
 +
 
 +
 
 +
4.P(tetR) + RBS + cinR +terminator +p(cinR)
 +
<table border="1" Frame="box">
 +
<tr><td>Vector</td><td>Insert</td></tr>
 +
<tr><td>p(cinR)</td><td>P(tetR) + RBS + cinR +terminator</td></tr>
 +
<tr><td>[http://partsregistry.org/Part:BBa_R0078 BBa_R0078]</td><td> </td></tr>
 +
<tr><td>pSB1A2</td><td></td></tr>
 +
</table>

Revision as of 09:54, 16 August 2009

parts planning

Contents

sensor

signal sensor
Planning osaka.PNG

3O6HSL P(tetR)+luxI

1.RBS + luxI

VectorInsert
RBSluxI
[http://partsregistry.org/Part:BBa_B0034 BBa_B0034][http://partsregistry.org/Part:BBa_C0161 BBa_C0161]
pSB1A2


2.RBS+ luxI + terminator

VectorInsert
double terminatorRBS+luxI
[http://partsregistry.org/Part:BBa_B0015 BBa_B0015]
pSB1AK3


3.P(tetR)+RBS+ luxI + terminator

VectorInsert
BBa_R0040RBS+luxI+terminator
[http://partsregistry.org/Part:BBa_R0040 BBa_R0040]
pSB1A2


C4HSL P(tetR)+rhlI

1.RBS + rhII

VectorInsert
RBSrhII
pSB1A2


2.RBS + rhII + terminator

VectorInsert
double terminatorRBS + rhII
[http://partsregistry.org/Part:BBa_B0015 BBa_B0015]
pSB1AK3


3.P(tetR) + RBS + rhlI + terminator

VectorInsert
p(tetR)RBS + rhII +terminator
[http://partsregistry.org/Part:BBa_R0040 BBa_R0040]
pSB1A2


AI-1 P(tetR)+lasI

1.RBS + LasI

VectorInsert
RBSLasI
pSB1A2


2.RBS + LasI +terminator

VectorInsert
double terminatorRBS + LasI +terminator
[http://partsregistry.org/Part:BBa_B0015 BBa_B0015]
pSB1AK3


3.P(tetR) + RBS + LasI +terminator

VectorInsert
p(tetR)RBS + LasI +terminator
[http://partsregistry.org/Part:BBa_R0040 BBa_R0040]
pSB1A2


3OH,C14:1-HSL P(tetR)+cinI

1. RBS + cinI

VectorInsert
RBScinI
pSB1A2


2.RBS + cinI +terminator

VectorInsert
double terminatorRBS + cinI +terminator
[http://partsregistry.org/Part:BBa_B0015 BBa_B0015]
pSB1AK3


3.P(tetR) + RBS + cinI +terminator

VectorInsert
p(tetR)RBS + cinI +terminator
[http://partsregistry.org/Part:BBa_R0040 BBa_R0040]
pSB1A2


receiver

signal receiver
Planning osaka receiver.PNG


3O6HSL luxpL+luxR+luxpR

[http://partsregistry.org/Part:BBa_F2621 BBa_F2621](1158bp)
pSB1A2


C4HSL p(tetR) + rhlR + RhlR+C4

1.RhlR+p(Rhl)

VectorInsert
RhlRp(RhlR)
[http://partsregistry.org/Part:BBa_I1466 BBa_I1466][http://partsregistry.org/Part:BBa_I14017 BBa_I14017]
pSB2K3

2.p(tetR)+RhlR+p(Rhl)

VectorInsert
p(tetR)RhlR+p(Rhl)
[http://partsregistry.org/Part:BBa_R0040 BBa_R0040]
pSB1A2


AI-1 p(tetR) + lasR + LasR+pAI

1. RBS + lasR

VectorInsert
RBSlasR
pSB1A2


2.RBS + lasR +terminator

VectorInsert
double terminatorRBS + lasR +terminator
[http://partsregistry.org/Part:BBa_B0015 BBa_B0015]
pSB1AK3


3.P(tetR) + RBS + lasR +terminator

VectorInsert
p(tetR)RBS + lasR +terminator
[http://partsregistry.org/Part:BBa_R0040 BBa_R0040]
pSB1A2


4.P(tetR) + RBS + lasR +terminator +lasR+pAI

VectorInsert
lasR+pAIP(tetR) + RBS + lasR +terminator
[http://partsregistry.org/Part:BBa_R0079 BBa_R0079]
pSB1A2


3OH,C14:1-HSL p(tetR) + cinR + cinR

1. RBS + cinR

VectorInsert
RBScinR
pSB1A2


2.RBS + cinR +terminator

VectorInsert
double terminatorRBS + cinR +terminator
[http://partsregistry.org/Part:BBa_B0015 BBa_B0015]
pSB1AK3


3.P(tetR) + RBS + cinR +terminator

VectorInsert
p(tetR)RBS + cinR +terminator
[http://partsregistry.org/Part:BBa_R0040 BBa_R0040]
pSB1A2


4.P(tetR) + RBS + cinR +terminator +p(cinR)

VectorInsert
p(cinR)P(tetR) + RBS + cinR +terminator
[http://partsregistry.org/Part:BBa_R0078 BBa_R0078]
pSB1A2