August/11 August 2009

From 2009.igem.org

(Difference between revisions)
Line 18: Line 18:
digestion with restriction enzyme
digestion with restriction enzyme
    
    
-
'''K204001'''
+
'''K204001'''
-
Vector1
+
<table border="1" Frame="box">
-
1-2M 12
+
<tr><th colspan="2">Vector</th><th colspan="2">Insert</th></tr>
-
SpeⅠ 1
+
<tr><td>1-2M</td><td>12</td><td>2-8M</td><td>5</td></tr>
-
PstⅠ 1
+
<tr><td>SpeI</td><td>1</td><td>XbaI</td><td>1</td><tr>
-
No.2 Buffer 2
+
<tr><td>PstI</td><td>1</td><td>PstI</td><td>1</td><tr>
-
dH2O 4
+
<tr><td> No.2 Buffer</td><td>2</td><td>No.2</td><td>2</td></tr>
-
total 20uL
+
<tr><td>dH2O</td><td>4</td><td>dH2O</td><td>11</td></tr>
 +
<tr><td>total</td><td>20uL</td><td>total</td><td>20uL</td></tr>
 +
</table>
 +
 
 +
 
   
   
-
Insert1
+
'''K204002'''
-
2-8M  5
+
 
-
XbaⅠ  1
+
<table border="1" Frame="box">
-
PstⅠ  1
+
<tr><th colspan="2">Vector</th><th colspan="2">Insert</th></tr>
-
No.2  2
+
<tr><td>1-23L</td><td>12</td><td>3-18O</td><td>5</td></tr>
-
dH2O  11
+
<tr><td>EcoRI</td><td>1</td><td>EcoRI</td><td>1</td><tr>
-
total  20 uL
+
<tr><td>XbaI</td><td>1</td><td>SpeI</td><td>1</td><tr>
-
+
<tr><td> No.2</td><td>2</td><td>No.2</td><td>2</td></tr>
-
+
<tr><td>dH2O</td><td>4</td><td>dH2O</td><td>11</td></tr>
-
'''K204002'''
+
<tr><td>total</td><td>20uL</td><td>total</td><td>20uL</td></tr>
-
Vector2
+
</table>
-
1-23L  12
+
 
-
EcoRⅠ 1
+
<br>
-
XbaⅠ  1
+
37°C , 2hr<br>
-
No.2   2
+
-
dH2O  4
+
-
total  20uL
+
-
+
-
Insert2
+
-
3-18O 5
+
-
EcoⅠ  1
+
-
SpeⅠ  1
+
-
No.2   2
+
-
dH2O   11
+
-
total 20uL
+
-
+
-
+
-
37℃ , 2hr
+
↓<br>
↓<br>
Line 69: Line 59:
  total      50uL
  total      50uL
  ↓
  ↓
-
  16℃ overnight
+
  16°C,overnight

Revision as of 11:29, 16 August 2009

1.before Min prep
Checked the cell cultures transformed and plated out yesterday (8/10) for colony formation and made an approximate count of the number of colonies.

(plate number)-(location on plate) (no. of colonies)
             1-23L                     100>
             1-15N                      10
             2-6P                       10<
             1-6I                       10<
             1-12H                      10
             1-18C                      10<
             1-20F                       ×

inoculate to iquid medium(5mL + Amp 5uL or Kan 25uL)


2.digestion and ligation

digestion with restriction enzyme

K204001

VectorInsert
1-2M122-8M5
SpeI1XbaI1
PstI1PstI1
No.2 Buffer2No.22
dH2O4dH2O11
total20uLtotal20uL


K204002

VectorInsert
1-23L123-18O5
EcoRI1EcoRI1
XbaI1SpeI1
No.22No.22
dH2O4dH2O11
total20uLtotal20uL


37°C , 2hr


gel electrophoresis
gel cut

purification by [QIAquick Nucleotide Removal Kit]

ligation

ligation
DNA        44
10* buffer 5
ligation   1
total      50uL
↓
16°C,overnight


3.Transformation
to get new plasmid

each 4uL(DNA) , 1-14F : 2uL
1-14H kan
1-14F kan
2-18F Amp ('8/10competent cell

1-23J Amp
1-12C Amp (super competent cell??