"
Team:Minnesota/Project
From 2009.igem.org
(→Computational Tools) |
(→Computational Tools) |
||
| Line 32: | Line 32: | ||
| - | The | + | The entire software suite can be found via the SynBioSS [http://synbioss.sourceforge.net home page]. |
=== SynBioSS Designer === | === SynBioSS Designer === | ||
Revision as of 18:52, 11 June 2009
| Home | The Team | The Project | Parts Submitted to the Registry | Modeling | Notebook |
|---|
| You can write a background of your team here. Give us a background of your team, the members, etc. Or tell us more about something of your choosing. |  |
|
Tell us more about your project. Give us background. Use this is the abstract of your project. Be descriptive but concise (1-2 paragraphs) |  |
| Team Example 2 |
Contents |
Computational Tools
The entire software suite can be found via the SynBioSS [http://synbioss.sourceforge.net home page].
SynBioSS Designer
SynBioSS Designer is an application for the automatic generation of sets of biomolecular reactions. This software allows a user to input the molecular parts involved in gene expression and regulation (e.g. promoters, transcription factors, ribosomes, etc.) The software then generates complete networks of reactions that represent transcription, translation, regulation, induction and degradation of those parts. To facilitate the creation of detailed kinetic models of synthetic gene networks composed of BioBricks, we have adapted SynBioSS Designer to automatically generate a kinetic model from a construct composed entirely of BioBricks. A NetCDF or SBML file is generated for simulations.
