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| | <h1>References (By Keyword)</h1> | | <h1>References (By Keyword)</h1> |
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| - | <h1>References</h1>
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| - |
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| - | <p>
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| - | Literature sorted alpha by author's last name.
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| - | <p>
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| - | Adam (1977) Shear degradation of DNA
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| - | </p>
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| - | <p>
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| - | Ang (1989) The Heat-Shock-Regulated grpE Gene of Escherichia coli Is Required for Bacterial Growth at All Temperatures but Is Dispensable in Certain Mutant Backgrounds
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| - | </p>
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| - | <p>
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| - | Apirion (1993) RNA processing in prokaryotic cells
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| - | </p>
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| - | <p>
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| - | Arkin (2008) Setting the standard in synthetic biology
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| - | </p>
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| - | <p>
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| - | Baba (2006) Construction of Escherichia coli K-12 in-frame, single gene knockout mutants: the Keio collection
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| - | </p>
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| - | <p>
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| - | Bernstein (2002) Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays
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| - | </p>
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| - | <p>
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| - | Bitinaite (2007) USERTM friendly DNA engineering and cloning method by uracil excision
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| - | </p>
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| - | <p>
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| - | Bouch (1973) Synthesis of Unmethylated Deoxyribonucleic Acid in a dnaB Temperature-Sensitive Mutant of Escherichia coli Starved for Methionine
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| - | </p>
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| - | <p>
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| - | Canton (2008) Refinement and standardization of synthetic biological parts and devices
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| - | </p>
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| - | <p>
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| - | Chakrabarti (2009) Shear unzipping of DNA
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| - | </p>
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| - | <p>
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| - | Chan (2005) Refactoring bacteriophage T7
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| - | </p>
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| - | <p>
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| - | Clark (1989) The fermentation pathways of Escherichia coli
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| - | </p>
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| - | <p>
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| - | Cox (2007) Programming gene expression with combinatorial promoters
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| - | </p>
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| - | <p>
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| - | Datsenko (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
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| - | </p>
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| - | <p>
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| - | Dekhtyar (2008) Triad pattern algorithms for predicting strong promoter candidates in bacterial genomes
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| - | </p>
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| - | <p>
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| - | Dancis (1978) Shear breakage of DNA
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| - | </p>
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| - | <p>
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| - | Davison (1959) The effect of hydrodynamic shear of DNA from T2 and T4 bacteriophages
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| - | </p>
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| - | <p>
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| - | Dennis (2004) Control of rRNA Synthesis in Escherichia coli: a Systems Biology Approach
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| - | </p>
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| - | <p>
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| - | DeVito (2007) Recombineering with tolC as a selectable/counter-selectable marker: remodeling the rRNA operons in Escherichia coli
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| - | </p>
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| - | <p>
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| - | Ellwood (1982) Chromosomal Locations of the Genes for rRNA in Escherichia coli K-12t
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| - | </p>
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| - | <p>
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| - | Eschenfeldt (2009) A family of LIC vectors for high through-put cloning and purification of proteins
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| - | </p>
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| - | <p>
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| - | Evans (1997) Dynamic strength of molecular adhesion bonds
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| - | </p>
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| - | <p>
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| - | Feher (2008) Scarless engineering of the Escherichia coli genome
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| - | </p>
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| - | <p>
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| - | Filpula (1978) Regulation of the Synthesis of Ribonucleoside Diphosphate Reductase in Escherichia coli: Specific Activity of the Enzyme in Relationship to Perturbations of DNA Replication
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| - | </p>
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| - | <p>
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| - | Flower (1986) The adjacent dnaZ and dnaX genes of Escherichia coli are contained within one continuous open reading frame
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| - | </p>
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| - | <p>
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| - | Fogg (2002) Structural basis for uracil recognition by archaeal family B DNA polymerases
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| - | </p>
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| - | <p>
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| - | Fukiya (2004) An improved method for deleting large regions of Escherichia coli K-12 chromosome using a combination of Cre/loxP and lambda red
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| - | </p>
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| - | <p>
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| - | Gerdes (2003) Experimental determination and systems level analysis of essential genes in Escherichia coli MG1665
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| - | </p>
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| - | <p>
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| - | Gibson (2008) One step assembly in yeast of 25 overlapping DNA fragments to form a complete synthetic Mycoplasma genitalium genome
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| - | </p>
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| - | <p>
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| - | Gibson (2008) Complete chemical synthesis, assembly, and cloning of a Mycoplasma genitalium
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| - | </p>
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| - | <p>
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| - | Gibson (2009) Enzymatic assembly of DNA molecules up to several hundred kilobases
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| - | </p>
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| - | <p>
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| - | Gil (2004) Determination of the core of a minimal bacterial gene set
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| - | </p>
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| - | <p>
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| - | Groth (2004) Phage integrases: biology and applications
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| - | </p>
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| - | <p>
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| - | Haber (2000) Shear induced assembly of lambda phage DNA
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| - | </p>
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| - | <p>
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| - | Haldimann (2001) Conditional-Replication, Integration, Excision, and Retrieval Plasmid-Host Systems for Gene Structure-Function Studies of Bacteria
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| - | </p>
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| - | <p>
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| - | Hashimoto (2005) Cell size and nucleoid organization of engineered Escherichia coli cells with a reduced genome
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| - | </p>
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| - | <p>
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| - | Hasunuma (1979) Effect of dna Mutations on the Replication of Plasmid pSC101 in Escherichia coli K-12
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| - | </p>
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| - | <p>
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| - | Hayashi (2006) Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
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| - | </p>
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| - | <p>
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| - | Hawley (1983) Compilation and analysis of Escherichia coli promoter DNA sequences
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| - | </p>
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| - | <p>
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| - | Heckman (2007) Gene splicing and mutagenesis by PCR driven overlap extension
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| - | </p>
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| - | <p>
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| - | Herring (2007) Gene replacement without selection: regulated suppression of amber mutations in Escherichia coli
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| - | </p>
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| - | <p>
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| - | Holt (2007) Rebuilding microbial genomes
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| - | </p>
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| - | <p>
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| - | Huang (1996) Binding of biotinylated DNA to streptavidin-coated polystyrene latex: effects of chain length and particle size
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| - | </p>
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| - | <p>
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| - | Jendrejack (2002) Stochastic simulations of DNA in flow: dynamics and the effects of hydrodynamic interactions
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| - | </p>
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| - | <p>
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| - | Jin (2006) Influences on gene expression in vivo by a Shine-Dalgarno sequence
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| - | </p>
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| - | <p>
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| - | Kaczanowska (2007) Ribosome biogenesis and the translation process in Escherichia coli
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| - | </p>
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| - | <p>
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| - | Katayama (1989) Genetic Suppression of a dnaG Mutation in Escherichia coli
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| - | </p>
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| - | <p>
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| - | Kato (2007) Construction of consecutive deletions of the Escherichia coli chromosome
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| - | </p>
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| - | <p>
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| - | Kato (2008) Construction of long chromosomal deletion mutants of Escherichia coli and minimization of the genome
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| - | </p>
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| - | <p>
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| - | Kelly (2009) Measuring the activity of BioBrick promoters using an in vivo reference standard
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| - | </p>
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| - | <p>
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| - | Kelman (1995) DNA polymerase III holoenzyme: structure and function of a chromosomal replicating machine
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| - | </p>
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| - | <p>
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| - | Kitagawa (2005) Complete set of ORF clones of Escherichia coli ASKA library (a complete set of Escherichia coli K-12 ORF archive): unique resources for biological research
| |
| - | </p>
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| - | <p>
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| - | Knight 2003 Idempotent Vector Design for Standard Assembly of Biobricks
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| - | </p>
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| - | <p>
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| - | Kolisnychenko (2002) Engineering a reduced Escherichia coli genome
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| - | </p>
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| - | <p>
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| - | Kornberg (1988) DNA Replication
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| - | </p>
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| - | <p>
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| - | Kowalczykowski (1994) Biochemistry of homologous recombination in Escherichia coli
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| - | </p>
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| - | <p>
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| - | Kudla (2009) Coding-sequence determinants of gene expression in Escherichia coli
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| - | </p>
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| - | <p>
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| - | Lau (2003) Spatial and temporal organization of replicating Escherichia coli chromosomes
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| - | </p>
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| - | <p>
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| - | Lee (2006) BioWarehouse: a bioinformatics database warehouse toolkit
| |
| - | </p>
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| - | <p>
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| - | Lengsfeld (2002) Shear-induced degradation of plasmid DNA
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| - | </p>
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| - | <p>
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| - | Levy (1999) Effect of shear on plasmid DNA in solution
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| - | </p>
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| - | <p>
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| - | Lu (2004) Vector NTI, a balanced all-in-one sequence analysis suite
| |
| - | </p>
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| - | <p>
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| - | Lu (2006) Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation
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| - | </p>
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| - | <p>
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| - | Manen (1991) Replication of plasmid pSC101
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| - | </p>
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| - | <p>
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| - | Masai (1988) Operon Structure of dnaT and dnaC Genes Essential for Normal and Stable DNA Replication of Escherichia coli Chromosome
| |
| - | </p>
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| - | <p>
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| - | Meyer (2000) Identification of the mob Genes of Plasmid pSC101 and Characterization of a Hybrid pSC101-R1162 System for Conjugal Mobilization
| |
| - | </p>
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| - | <p>
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| - | Mizushima (1998) Site-directed Mutational Analysis for the ATP Binding of DnaA Protein
| |
| - | </p>
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| - | <p>
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| - | Morgan (1977) Identification of spacer tRNA genes in individual ribosomal RNA transcription units of Escherichia coli
| |
| - | </p>
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| - | <p>
| |
| - | Muyrers (2001) Techniques: recombinogenic engineering - new options for cloning and manipulating DNA
| |
| - | </p>
| |
| - | <p>
| |
| - | Nomura (1999) Engineering of bacterial ribosomes: Replacement of all seven Escherichia coli rRNA operons by a single plasmid-encoded operon
| |
| - | </p>
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| - | <p>
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| - | Posfai (1999) Markerless gene replacement in Escherichia coli stimulated by double strand break in the chromosome
| |
| - | </p>
| |
| - | <p>
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| - | Posfai (2006) Emergent properties of reduced genome Escherichia coli
| |
| - | </p>
| |
| - | <p>
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| - | Rao (1994) Conjugal Mobilization of Plasmid DNA: Termination Frequency at the Origin of Transfer of Plasmid R1162
| |
| - | </p>
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| - | <p>
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| - | Reyes-Lamothe (unknown) Escherichia coli and its chromosome
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| - | </p>
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| - | <p>
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| - | Richmond (1999) Genome-wide expression profiling in Escherichia coli K-12
| |
| - | </p>
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| - | <p>
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| - | Rocha (2004) The replication-related organization of bacterial genomes
| |
| - | </p>
| |
| - | <p>
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| - | Rubin (1999) In vivo transposition of mariner based elements in enteric bacteria and mycobacteria
| |
| - | </p>
| |
| - | <p>
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| - | Sezonov (2007) Escherichia coli physiology in Luria-Bertani broth
| |
| - | </p>
| |
| - | <p>
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| - | Sheng (1995) Transformation of Escherichia coli with large DNA molecules by electroporation
| |
| - | </p>
| |
| - | <p>
| |
| - | Shetty (2008) Engineering BioBrick vectors from BioBrick parts
| |
| - | </p>
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| - | <p>
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| - | Shizuya (1992) Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector
| |
| - | </p>
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| - | <p>
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| - | Siegele (1997) Gene expression from plasmids containing the araBAD promoter at subsaturating inducer concentrations represents mixed populations
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| - | </p>
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| - | <p>
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| - | Vocke (1983) Primary structure of the essential replicon of the plasmid pSC101
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| - | </p>
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| - | <p>
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| - | Warming (2005) Simple and highly efficient BAC recombineering using galK selection
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| - | </p>
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| - | <p>
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| - | Warren (2008) Transcription of foreign DNA in Escherichia coli
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| - | </p>
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| - | <p>
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| - | Woodside (2008) Folding and unfolding single RNA molecules under tension
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| - | </p>
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| - | <p>
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| - | Yamamoto (1974) Replication of Escherichia coli requires DNA polymerase 1
| |
| - | </p>
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| - | <p>
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| - | Yu (2008) Rapid and efficient construction of markerless deletions in the Escherichia coli genome
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| - | </p>
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| - | <p>
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| - | Zhang (2000) DNA cloning by homologous recombination in Escherichia coli
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| - | </p>
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