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| <td align="center"><br><bR> | | <td align="center"><br><bR> |
- | <font face="Pristina" size="50" ><b>Protocols</b></font> | + | <font face="Pristina" size="50" ><b>Instruments</b></font> |
| </td> | | </td> |
| </html> | | </html> |
| </tr> | | </tr> |
| <tr> | | <tr> |
- | <td> {{UNIPV-Pavia/Protocols}}</td> | + | <td> {{UNIPV-Pavia/Instruments}}</td> |
| </tr> | | </tr> |
| </table> | | </table> |
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| <br> | | <br> |
- | =='''Electrophoresis'''== | + | == ''Water bath'' == |
- | ''(estimated time: 2 hours)''
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| <br> | | <br> |
| <br> | | <br> |
- | <table width='80%'><tr><td>
| + | {| |
- | *Prepare agarose gel in 1x TBE buffer
| + | |[[Image:pv_vasche.jpg|thumb|350px|left|Electrophoresis instrumentation]] |
- | *Add ethidium bromide (using gloves and face mask for your safety):
| + | |
- | **1 µl in the small size agarose gel (70 ml)
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- | **2 µl in the middle size agarose gel (150 ml)
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- | **4 µl in the big size agarose gel (250 ml)
| + | |
- | *Cast the gel, insert the well-forming comb and let it polymerize
| + | |
- | *Add the loading buffer to each sample
| + | |
- | *Load the samples and 8 µl of marker
| + | |
- | *Set to 70-100 volts and electrophorese for the required amount of time
| + | |
- | *Use UV-light to look at the bands
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- | *Take a picture of the gel, if needed (not when bands have to be cut!!!)
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- | <br><br><br><br><br><br><br><br>
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- | <br></td><td align='center' valign='bottom' width='300px'>
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- | <div align='center'>
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- | <table border='1'>
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- | <tr><td>
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- | <font class='label'>
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- | '''DNA samples'''<hr color='white' width='70%'>
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- | '''Ethidium bromide'''<hr color='white' width='70%'>
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- | '''Loading buffer 10x Blue Juice, Invitrogen'''<hr color='white' width='70%'>
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- | '''TBE (Tris/Borate/EDTA buffer) 5x (final volume 1 liter)'''
| + | |
- | *'''54 gr Tris'''
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- | *'''27.5 gr Borate'''<hr color='white' width='70%'>
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- | '''20 ml EDTA 0.5 M (pH 8)'''<hr color='white' width='70%'>
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- | '''Marker (1 kb DNA Ladder, Promega)'''<hr color='white' width='70%'>
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- | '''Face mask and gloves'''<hr color='white' width='70%'>
| + | |
- | '''Electrophoresis apparatus'''<hr color='white' width='70%'>
| + | |
- | '''Transilluminator'''</font>
| + | |
- | </td></tr></table></div><br><br><br><br>
| + | |
- | </td></tr></table>
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- | | + | |
- | *NOTE: when not specified, the marker has the following pattern:
| + | |
- | {|align="center" | + | |
- | |[[Image:pv_ladder.jpg]] | + | |
| |} | | |} |