Team:Warsaw/Modelling

Complicated gene regulatory networks are difficult to visualise. System Biology Graphical Notation provides a way to present the processes In an easily understandable manner. However one of the main challenges while using SBGN is to visualise processes that take place at different times and depend on each other. This year because of the complexity of out Project we decided to add the 4th dimension to graphical notation. We prepared a javaFX application that takes into account the dependencies between entities and provide appropriate Visual output. Below you can see the output that mimics the desired behaviour of our system.