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Team:Berkeley Software/Misc
From 2009.igem.org
Contents |
Draft Specification
This section details a draft specification for the next version of Eugene, Spectacles, and the Clotho environment.
Eugene:
Support for
Collaboration
For all of our projects, we worked with a number of different groups both to make our tools more visible, as well as get valuable feedback. This section discusses some of these collaborations.
UC Berkeley iGEM team - we worked very closely with our wet team counter parts to tie our Kepler based assembly workflows with the Beckman Coulter BioMek 3000 liquid handling robot that they used. In addition we beta tested our software with them, incorporated their feedback, and ran tutorial sessions on Clotho use and how to write Clotho plug-ins.
Stanford iGEM team - we provided early versions of Spectacles to the Stanford iGEM team so that they could test it out. In addition we worked with them to incorporate new iconography as they added it to the SBOL Visual effort.
University of Minnesota - Emma Weeding worked with us
Joint BioEnergy Institute (JBEI) -
Valencia - In addition to many other iGEM teams, we filled out their survey and received a gold medal (100% team participation).
Support for New Technical Standard
SBOL Visual-
SBOL Semantic -
