Team:UC Davis/Contacts References

 

1. Ze-Chun Yuan, Pu Liu, Panatda Saenkham, Kathleen Kerr, and Eugene W. Nester (2007). Transcriptome Profiling and Fuctional Analysis of Agrobacterium tumefaciens Reveals a General Conserved Response to Acidic Conditions (pH 5.5) and a Complex Acid-Mediated Signaling Involved in Agrobacterium-Plant Interactions. Journal of Bacteriology. Jan. 208, p. 494-507.

2.Luoping Li, Yonghui Jia, Qingming Hou, Trevor C. Charles, Eugene W. Nester, and Shen Q. Pan. (2002). A global pH sensor: Agrobacterium sensor protein ChvG regulates acid-inducible genes on its two chromosomes and Ti plasmid. PNAS. (99)19.12369-12374

3. Nicholas J. Mantis and Stephen C. Winans. (1993), The Chromosomal Response Regulatory Gene chvI of Agrobacterium tumefaciens Complements an Escherichia coli
phoB Mutation and Is Required for Virulence. J. Microbiology. Oct. 1993, p.6626-6636.

4. Trevor C. Charles and Eugene W. Nester. (1993). A Chromosomally Encoded Two-Component Sensory Transduction System Is Required for Virulence of Agrobacterium tumefaciens. J. Bacteriology. Oct. 1993, p. 6614-6625.

5.Jeffrey M. Skerker, Barrett S. Perchuk, Albert Siryaporn, Emma A. Lubin, Orr Ashenberg, Mark Goulian and Michael T. Laub. (2008). Rewiring the Specificity of Two-Component Signal Transduction Systems. Cell. (133). 6. pp.1043-1054.

6.Takashi Aoyama, Mituru Takanami, Kozo Makino, and Atsuhiro Oka. (1991). Cross-talk between the virulence and phosphate regulons of Agrobacterium tumefaciens caused by an unusual interaction of the transcriptional activator with a regulatory DNA element. . Mol. Gen. Genet. (1991). 227(3), pp.385-390.

7. Edwin van Bloois. Remko T. Winter. Dick B. Janssen, Marco W. Fraaije. 2009, Export of functional Streptomyces coelicolor alditol oxidase to the periplasm or cell surface of Escherichia coli and its application in whole-cell biocatalysis. (2009). Appl. Microbiol. Biotechnol. (2009). 83(4). p. 679-687.

8.Dariusz Stepniak, Liesbeth Spaenij-Dekking, Cristina Mitea, Martine Moester, Arnoud de Ru, Renee Baak-Pablo, Peter van Veelen, Luppo Edens and Frits Koning. (2006). Highly efficient gluten degradation with a newly identified prolyl endoprotease: implications for celiac disease. Am J Physiol Gastrointest Liver Physiol. (2006).291(4): G621-G629.

9. Heung-Chae Junge, Joon-Hyun Park, Seung-Hwan Park, Jean-Michel Lebeault, and Jae-Gu Pan. (1998). Expression of carboxymethylcellulase on the Surface of Escerichia coli using Pseudomonas syringae ice nucleation protein. Enzyme and Microbial Technology. (1998). 22(5): 348-354.

10. Michael Klose, Anja Störiko, York-Dieter Stierhof, Ingrid Hindennach, Bettina Mutschler, and Ulf Henning. (1993). Membrane Assembly of the Outer Membrane Protein OmpA of Escherichia coli. Journal of Biological Chemistry. (268) 34, pp. 25664-25670.

11.The Celiac Site. (2009). http://digestive.niddk.nih.gov/ddiseases/pubs/celiac/

12.Jonathan Gass, Michael T. Bethune, Matthew Siegel, Andrew Spencer, and Chaitan Khosla. (2007). Combination Enzyme Therapy for Gastric Digestion of Dietary Gluten in Patients With Celiac Sprue. Gastroenterology. 2007; 133: 472-480.

13.Roland Freud, Michael Klose, and Ulf Henning. (1989). Export and Sorting of the Escherichia coli Outer Membrane Protein OmpA. Journal of Bioenergetics and Biomembranes. 22 (3). pp.441-449.

14.National Digestive Diseases Information Clearinghouse (NDDIC). September 2008. http://digestive.niddk.nih.gov/ddiseases/pubs/celiac/

15. Se Whan Park, Moon Gyu Chung, Hwa Young Lee, Jeong Yoon Kim, and Young Ha Rhee. (2008). Stable expression and secretion of the polyhydroxybutyrate depolymerase of Paucimonas lemoignei in Escherichia coli.  J. Microbiology. 46(6). pp. 662-669.  

Safety:

1. Would any of your project ideas raise safety issues in terms of:
   • researcher safety,  NONE
   • public safety, or  NONE
   • environmental safety?  NONE
     
2. Is there a local biosafety group, committee, or review board at your institution?  YES
   
3. What does your local biosafety group think about your project? THEY FIND IT SAFE - REGULAR LAB STRAIN ECOLI AND GFP
   
4. Do any of the new BioBrick parts that you made this year raise any safety issues?  NO
   • If yes, did you document these issues in the Registry? N/A