EPF-Lausanne/6 July 2009

From 2009.igem.org

(Difference between revisions)
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===06.07.09===
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Four forward primers were designed to amplify:
Four forward primers were designed to amplify:
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1.Promoter T7, RBS, CBP and LOVTAP:
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<br> 1.Promoter T7, RBS, CBP and LOVTAP:  
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:gtttcttcgaattcgcggccgcttctagagtaatacgactcactataggggaattgtg  
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    gtttcttcgaattcgcggccgcttctagagtaatacgactcactataggggaattgtg  
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2.RBS, CBP and LOVTAP:  
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:gtttcttcgaattcgcggccgcttctagagtgtttaactttaagaaggag
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2.RBS, CBP and LOVTAP:
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3.CBP and LOVTAP:  
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:gtttcttcgaattcgcggccgcttctagatgaagcgacgatggaaaaagaatttcatag
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    gtttcttcgaattcgcggccgcttctagagtgtttaactttaagaaggag  
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4.LOVTAP:  
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:gtttcttcgaattcgcggccgcttctagatgctactacacttgaacgtattgagaagaac
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3.CBP and LOVTAP:
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One reverse primer were designed:  
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:gtttcttcctgcagcggccgctactagtatcaatcgcttttcagcaacacctcttc
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    gtttcttcgaattcgcggccgcttctagatgaagcgacgatggaaaaagaatttcatag  
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4.LOVTAP:
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    gtttcttcgaattcgcggccgcttctagatgctactacacttgaacgtattgagaagaac  
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One reverse primer were designed:
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    gtttcttcctgcagcggccgctactagtatcaatcgcttttcagcaacacctcttc  
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The recipient IGEM part have been chosen: BBa_B0010, well 13D in the received kit plate 1
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The '''recipient IGEM part''' have been chosen: [http://partsregistry.org/partsdb/get_part.cgi?part=BBa_B0010 BBa_B0010], well 13D in the received kit plate 1

Revision as of 15:35, 27 July 2009

06.07.09

LOVTAP plasmid AND TrpR plasmid were transformed in competent E. Coli following received protocol, and grown overnight (see Lab book for more details).
One problem: we actually don't know TrpR plasmid resistance, so we tried with three resistances available in the lab: Amp., Kana. and Chl. LOVTAP is in a plasmid called pCal-n (see picture below):

pCal-n plasmid


Some comments on the plasmid:
-CBP is a small peptide with which we could purify LOVTAP protein
-Thrombin target is a nucleotidic sequence that can be recognized by thrombin a peptidase. This peptidase will cut CBP once LOVTAP is purified


06.07.09

Four forward primers were designed to amplify:
1.Promoter T7, RBS, CBP and LOVTAP:

gtttcttcgaattcgcggccgcttctagagtaatacgactcactataggggaattgtg

2.RBS, CBP and LOVTAP:

gtttcttcgaattcgcggccgcttctagagtgtttaactttaagaaggag

3.CBP and LOVTAP:

gtttcttcgaattcgcggccgcttctagatgaagcgacgatggaaaaagaatttcatag

4.LOVTAP:

gtttcttcgaattcgcggccgcttctagatgctactacacttgaacgtattgagaagaac

One reverse primer were designed:

gtttcttcctgcagcggccgctactagtatcaatcgcttttcagcaacacctcttc


The recipient IGEM part have been chosen: [http://partsregistry.org/partsdb/get_part.cgi?part=BBa_B0010 BBa_B0010], well 13D in the received kit plate 1