IllinoisTools/26 September 2009

From 2009.igem.org

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(9/20-9/26)
 
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{{IllinoisToolsCalendar}}
{{IllinoisToolsCalendar}}
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== 7/26-8/1 ==
+
== 9/20-9/26 ==
'''Donny'''
'''Donny'''
-
I switched the database over from sqlite to mysql so that it can run smoothly with Dr. Bhalerao's server. In this process, I got a chance to verify and utilize Nate's new updater scripts.
+
I switched the database over from sqlite to mysql so that it can run smoothly with Dr. Bhalerao's server. In this process, I got a chance to verify and utilize Nate's new updater scripts. In addition, I was able to get a more updated version of the network built that incorporated any changes in Kegg.
'''Riyad'''
'''Riyad'''
 +
Wrote a biobrick program that analyzes a sequence for biobrick restriction enzyme sites and then adds the associated prefix and suffix
Wrote a biobrick program that analyzes a sequence for biobrick restriction enzyme sites and then adds the associated prefix and suffix
 +
 +
 +
'''Palak'''
 +
 +
I looked at some final features we could add to our program given the time that we have left. We are all busy with school now, it's been hard trying to find time to finish our project. I determined that creating a stochiometric matrix should be feasible. I also gathered some of our old resources and began documenting them in the resources section of our wiki.
 +
 +
'''Nate'''
 +
 +
I finished writing the gene data updater script.  It was difficult, but I was able to get it done.  Once I finished this, I sent this and the enzyme data updater script to Donny for tweaking and integration into our webtool
 +
 +
'''Kanishka'''
 +
 +
Helped write proposal and future changes to our project for potential donors and organizations that could support us.

Latest revision as of 23:14, 21 October 2009

Notebookanimationillinoistools.gif

      • Note: Our notebook is organized in a weekly fashion. Click on the Saturday of every week to view the notes from the previous week.


May
MTWTFSS
        [http://2009.igem.org/IllinoisTools/1_May_2009 1] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/2_May_2009&action=edit 2] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/3_May_2009&action=edit 3]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/4_May_2009&action=edit 4] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/5_May_2009&action=edit 5] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/6_May_2009&action=edit 6] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/7_May_2009&action=edit 7] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/8_May_2009&action=edit 8] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/9_May_2009&action=edit 9] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/10_May_2009&action=edit 10]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/11_May_2009&action=edit 11] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/12_May_2009&action=edit 12] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/13_May_2009&action=edit 13] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/14_May_2009&action=edit 14] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/15_May_2009&action=edit 15] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/16_May_2009&action=edit 16] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/17_May_2009&action=edit 17]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/18_May_2009&action=edit 18] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/19_May_2009&action=edit 19] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/20_May_2009&action=edit 20] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/21_May_2009&action=edit 21] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/22_May_2009&action=edit 22] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/23_May_2009&action=edit 23] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/24_May_2009&action=edit 24]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/25_May_2009&action=edit 25] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/26_May_2009&action=edit 26] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/27_May_2009&action=edit 27] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/28_May_2009&action=edit 28] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/29_May_2009&action=edit 29] [http://2009.igem.org/IllinoisTools/30_May_2009 30] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/31_May_2009&action=edit 31]
June
MTWTFSS
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/1_June_2009&action=edit 1] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/2_June_2009&action=edit 2] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/3_June_2009&action=edit 3] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/4_June_2009&action=edit 4] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/5_June_2009&action=edit 5] [http://2009.igem.org/IllinoisTools/6_June_2009 6] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/7_June_2009&action=edit 7]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/8_June_2009&action=edit 8] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/9_June_2009&action=edit 9] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/10_June_2009&action=edit 10] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/11_June_2009&action=edit 11] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/12_June_2009&action=edit 12] [http://2009.igem.org/IllinoisTools/13_June_2009 13] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/14_June_2009&action=edit 14]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/15_June_2009&action=edit 15] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/16_June_2009&action=edit 16] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/17_June_2009&action=edit 17] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/18_June_2009&action=edit 18] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/19_June_2009&action=edit 19] [http://2009.igem.org/IllinoisTools/20_June_2009 20] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/21_June_2009&action=edit 21]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/22_June_2009&action=edit 22] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/23_June_2009&action=edit 23] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/24_June_2009&action=edit 24] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/25_June_2009&action=edit 25] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/26_June_2009&action=edit 26] [http://2009.igem.org/IllinoisTools/27_June_2009 27] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/28_June_2009&action=edit 28]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/29_June_2009&action=edit 29] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/30_June_2009&action=edit 30]
July
MTWTFSS
    [http://2009.igem.org/wiki/index.php?title=IllinoisTools/1_July_2009&action=edit 1] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/2_July_2009&action=edit 2] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/3_July_2009&action=edit 3] [http://2009.igem.org/IllinoisTools/4_July_2009 4] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/5_July_2009&action=edit 5]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/6_July_2009&action=edit 6] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/7_July_2009&action=edit 7] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/8_July_2009&action=edit 8] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/9_July_2009&action=edit 9] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/10_July_2009&action=edit 10] [http://2009.igem.org/IllinoisTools/11_July_2009 11] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/12_July_2009&action=edit 12]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/13_July_2009&action=edit 13] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/14_July_2009&action=edit 14] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/15_July_2009&action=edit 15] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/16_July_2009&action=edit 16] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/17_July_2009&action=edit 17] [http://2009.igem.org/IllinoisTools/18_July_2009 18] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/19_July_2009&action=edit 19]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/20_July_2009&action=edit 20] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/21_July_2009&action=edit 21] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/22_July_2009&action=edit 22] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/23_July_2009&action=edit 23] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/24_July_2009&action=edit 24] [http://2009.igem.org/IllinoisTools/25_July_2009 25] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/26_July_2009&action=edit 26]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/27_July_2009&action=edit 27] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/28_July_2009&action=edit 28] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/29_July_2009&action=edit 29] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/30_July_2009&action=edit 30] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/31_July_2009&action=edit 31]
August
MTWTFSS
          [http://2009.igem.org/IllinoisTools/1_August_2009 1] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/2_August_2009&action=edit 2]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/3_August_2009&action=edit 3] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/4_August_2009&action=edit 4] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/5_August_2009&action=edit 5] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/6_August_2009&action=edit 6] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/7_August_2009&action=edit 7] [http://2009.igem.org/IllinoisTools/8_August_2009 8] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/9_August_2009&action=edit 9]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/10_August_2009&action=edit 10] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/11_August_2009&action=edit 11] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/12_August_2009&action=edit 12] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/13_August_2009&action=edit 13] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/14_August_2009&action=edit 14] [http://2009.igem.org/IllinoisTools/15_August_2009 15] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/16_August_2009&action=edit 16]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/17_August_2009&action=edit 17] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/18_August_2009&action=edit 18] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/19_August_2009&action=edit 19] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/20_August_2009&action=edit 20] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/21_August_2009&action=edit 21] [http://2009.igem.org/IllinoisTools/22_August_2009 22] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/23_August_2009&action=edit 23]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/24_August_2009&action=edit 24] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/25_August_2009&action=edit 25] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/26_August_2009&action=edit 26] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/27_August_2009&action=edit 27] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/28_August_2009&action=edit 28] [http://2009.igem.org/IllinoisTools/29_August_2009 29] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/30_August_2009&action=edit 30]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/31_August_2009&action=edit 31]
September
MTWTFSS
  [http://2009.igem.org/wiki/index.php?title=IllinoisTools/1_September_2009&action=edit 1] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/2_September_2009&action=edit 2] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/3_September_2009&action=edit 3] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/4_September_2009&action=edit 4] [http://2009.igem.org/IllinoisTools/5_September_2009 5] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/6_September_2009&action=edit 6]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/7_September_2009&action=edit 7] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/8_September_2009&action=edit 8] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/9_September_2009&action=edit 9] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/10_September_2009&action=edit 10] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/11_September_2009&action=edit 11] [http://2009.igem.org/IllinoisTools/12_September_2009 12] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/13_September_2009&action=edit 13]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/14_September_2009&action=edit 14] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/15_September_2009&action=edit 15] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/16_September_2009&action=edit 16] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/17_September_2009&action=edit 17] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/18_September_2009&action=edit 18] [http://2009.igem.org/IllinoisTools/19_September_2009 19] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/20_September_2009&action=edit 20]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/21_September_2009&action=edit 21] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/22_September_2009&action=edit 22] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/23_September_2009&action=edit 23] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/24_September_2009&action=edit 24] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/25_September_2009&action=edit 25] [http://2009.igem.org/IllinoisTools/26_September_2009 26] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/27_September_2009&action=edit 27]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/28_September_2009&action=edit 28] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/29_September_2009&action=edit 29] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/30_September_2009&action=edit 30]
October
MTWTFSS
      [http://2009.igem.org/wiki/index.php?title=IllinoisTools/1_October_2009&action=edit 1] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/2_October_2009&action=edit 2] [http://2009.igem.org/IllinoisTools/3_October_2009 3] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/4_October_2009&action=edit 4]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/5_October_2009&action=edit 5] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/6_October_2009&action=edit 6] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/7_October_2009&action=edit 7] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/8_October_2009&action=edit 8] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/9_October_2009&action=edit 9] [http://2009.igem.org/IllinoisTools/10_October_2009 10] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/11_October_2009&action=edit 11]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/12_October_2009&action=edit 12] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/13_October_2009&action=edit 13] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/14_October_2009&action=edit 14] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/15_October_2009&action=edit 15] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/16_October_2009&action=edit 16] [http://2009.igem.org/IllinoisTools/17_October_2009 17] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/18_October_2009&action=edit 18]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/19_October_2009&action=edit 19] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/20_October_2009&action=edit 20] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/21_October_2009&action=edit 21] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/22_October_2009&action=edit 22] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/23_October_2009&action=edit 23] [http://2009.igem.org/IllinoisTools/24_October_2009 24] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/25_October_2009&action=edit 25]
[http://2009.igem.org/wiki/index.php?title=IllinoisTools/26_October_2009&action=edit 26] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/27_October_2009&action=edit 27] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/28_October_2009&action=edit 28] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/29_October_2009&action=edit 29] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/30_October_2009&action=edit 30] [http://2009.igem.org/wiki/index.php?title=IllinoisTools/31_October_2009&action=edit 31]

9/20-9/26

Donny

I switched the database over from sqlite to mysql so that it can run smoothly with Dr. Bhalerao's server. In this process, I got a chance to verify and utilize Nate's new updater scripts. In addition, I was able to get a more updated version of the network built that incorporated any changes in Kegg.

Riyad

Wrote a biobrick program that analyzes a sequence for biobrick restriction enzyme sites and then adds the associated prefix and suffix


Palak

I looked at some final features we could add to our program given the time that we have left. We are all busy with school now, it's been hard trying to find time to finish our project. I determined that creating a stochiometric matrix should be feasible. I also gathered some of our old resources and began documenting them in the resources section of our wiki.

Nate

I finished writing the gene data updater script. It was difficult, but I was able to get it done. Once I finished this, I sent this and the enzyme data updater script to Donny for tweaking and integration into our webtool

Kanishka

Helped write proposal and future changes to our project for potential donors and organizations that could support us.