User contributions
From 2009.igem.org
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- 18:21, 3 October 2009 (diff | hist) Team:Alberta/Project/Modeling
- 17:55, 3 October 2009 (diff | hist) Team:Alberta/Project/Modeling/InvertList
- 17:55, 3 October 2009 (diff | hist) Team:Alberta/Project/Modeling/InvertList
- 07:15, 2 October 2009 (diff | hist) N Team:Alberta/Project/Modeling/MaxMinAvg (New page: %Since FindMinimalGenomes.m finds an indefinite number of possible minimal genomes, the researcher is likely going to want to know %how small the smallest list is, and where in the cell...)
- 07:07, 2 October 2009 (diff | hist) N Team:Alberta/Project/Modeling/MediaChange (New page: model = changeRxnBounds(model,{'EX_glc(e)','EX_gly(e)','EX_ala_D(e)','EX_ala_L(e)','EX_arg_L(e)','EX_asn_L(e)','EX_asp_L(e)','EX_cys_D(e)','EX_cys_L(e)','EX_gln_L(e)','EX_glu_L(e)','EX_hi...)
- 07:05, 2 October 2009 (diff | hist) N Team:Alberta/Project/Modeling/FindMatches (New page: %Finds the number of elements in List2 that match with %any other element in List1. Also makes a new list consisting of those %matches from List2. (It does not make a difference which...)
- 06:58, 2 October 2009 (diff | hist) Team:Alberta/Project/Modeling/InvertList
- 06:56, 2 October 2009 (diff | hist) N Team:Alberta/Project/Modeling/InvertList (New page: %Creates a list of genes called InvertedList that includes all genes in %WithThis that are not present in InvertThis. %InvertThis = essgenes; %WithThis=model.genes; function [InvertedLi...)
- 06:53, 2 October 2009 (diff | hist) N Team:Alberta/Project/Modeling/CheckForRepeats (New page: %Will output a list of repeats from the input list. function [TheRepeats, WithoutRepeats] = CheckForRepeats(CheckThisList) NumberOfAppearances=zeros(1,length(CheckThisList)); for a=...)
- 06:50, 2 October 2009 (diff | hist) Team:Alberta/Project/Modeling
- 06:31, 2 October 2009 (diff | hist) Team:Alberta/Project/Modeling/FindEssentials
- 06:30, 2 October 2009 (diff | hist) Team:Alberta/Project/Modeling/start
- 06:30, 2 October 2009 (diff | hist) N Team:Alberta/Project/Modeling/start (New page: %start changeCobraSolver('glpk'); model = readCbModel() %('Ec_iAF1260_flux1.xml') solution1 = optimizeCbModel(model, 'max', 'false', 'false'); essgenes=cell(1) fValue = solution1.f ...)
- 06:27, 2 October 2009 (diff | hist) Team:Alberta/Project/Modeling/FindEssentials
- 06:26, 2 October 2009 (diff | hist) N Team:Alberta/Project/Modeling/FindEssentials (New page: %start.m script changeCobraSolver('glpk'); model = readCbModel() %('Ec_iAF1260_flux1.xml') solution1 = optimizeCbModel(model, 'max', 'false', 'false'); essgenes=cell(1) fValue = so...)
- 04:54, 21 September 2009 (diff | hist) Team:Alberta/Project/Modeling
- 04:50, 21 September 2009 (diff | hist) N Team:Alberta/Project/Modeling/FindMinimalGenome (New page: function [MinimalGenomes, UnEssentialGeneLists]=FindMinimalGenomes(TheModel, NumberOfMinGenomes, FinalGrowthRate, InitialFilterK, NumberOfSteps) %NumberOfMinGenomes: Number of minimal ge...)
- 04:34, 21 September 2009 (diff | hist) Team:Alberta/Project/Modeling
- 04:28, 21 September 2009 (diff | hist) N File:UofA09 ModelFlow.jpeg (top)
- 00:18, 18 September 2009 (diff | hist) m Team:Alberta/Project/Microfluidics
- 00:17, 18 September 2009 (diff | hist) Team:Alberta/Project/Microfluidics
- 07:33, 17 September 2009 (diff | hist) Team:Alberta/Project/Microfluidics
- 07:31, 17 September 2009 (diff | hist) Team:Alberta/Project/Microfluidics
- 07:26, 17 September 2009 (diff | hist) Team:Alberta/Project/Microfluidics
- 07:19, 17 September 2009 (diff | hist) Team:Alberta/Project/Microfluidics
- 07:02, 17 September 2009 (diff | hist) Team:Alberta/Project/Modeling
- 07:00, 17 September 2009 (diff | hist) Team:Alberta/Project/Modeling
- 06:39, 17 September 2009 (diff | hist) Team:Alberta/Project/Modeling
- 06:39, 17 September 2009 (diff | hist) Team:Alberta/Project/Modeling
- 06:22, 17 September 2009 (diff | hist) Team:Alberta/Project/Modeling
- 07:05, 15 September 2009 (diff | hist) Team:Alberta/Project/Microfluidics
- 06:57, 15 September 2009 (diff | hist) N File:UofA09 Micro3.png (Close-up of a microfluidic chip.) (top)
- 06:56, 15 September 2009 (diff | hist) File:UofA09 Micro3.jpg (uploaded a new version of "Image:UofA09 Micro3.jpg": Close-up of a microfluidic chip.) (top)
- 06:55, 15 September 2009 (diff | hist) N File:UofA09 Micro3.jpg (Close-up of a microfluidic chip.)
- 06:55, 15 September 2009 (diff | hist) N File:UofA09 Micro2.jpg (4 Prototype chips with dyes.) (top)
- 06:54, 15 September 2009 (diff | hist) File:UofA09 Micro1.png (uploaded a new version of "Image:UofA09 Micro1.png": 3 of our prototype microfluidic chips built for miniaturization and automation of our novel BioByte assembly method. They are filled with dye so that the micro-channels are visible.) (top)
- 06:52, 15 September 2009 (diff | hist) File:UofA09 Micro1.png (uploaded a new version of "Image:UofA09 Micro1.png": 3 of our prototype microfluidic chips built for miniaturization and automation of our novel BioByte assembly method. They are filled with dye so that the micro-channels are visible.)
- 06:51, 15 September 2009 (diff | hist) File:UofA09 Micro1.jpg (uploaded a new version of "Image:UofA09 Micro1.jpg": 3 of our prototype microfluidic chips built for miniaturization and automation of our novel BioByte assembly method. They are filled with dye so that the micro-channels are visible.) (top)
- 06:50, 15 September 2009 (diff | hist) N File:UofA09 Micro1.jpg (3 of our prototype microfluidic chips built for miniaturization and automation of our novel BioByte assembly method. They are filled with dye so that the micro-channels are visible.)
- 06:39, 15 September 2009 (diff | hist) N File:UofA MicroA.png (Snapshot of an explanatory animation for how we use the microfluidic chip.) (top)
- 05:29, 15 September 2009 (diff | hist) Team:Alberta/Project/Microfluidics
- 05:27, 15 September 2009 (diff | hist) N File:UofA09 Micro1.png (3 of our prototype microfluidic chips built for miniaturization and automation of our novel BioByte assembly method. They are filled with dye so that the micro-channels are visible.)
- 05:19, 15 September 2009 (diff | hist) Team:Alberta/Project/Microfluidics
- 05:15, 15 September 2009 (diff | hist) N File:UofA09 Micro1.JPG (3 of our prototype microfluidic chips built for miniaturization and automation of our novel BioByte assembly method. They are filled with dye so that the micro-channels are visible.) (top)
- 18:49, 14 September 2009 (diff | hist) Team:Alberta/Project/Microfluidics
- 04:50, 14 September 2009 (diff | hist) Team:Alberta/Project/Microfluidics
- 02:59, 14 September 2009 (diff | hist) Team:Alberta/Project/Bioinformatics
- 19:47, 16 July 2009 (diff | hist) Team:Alberta/Modeling (top)
- 18:55, 16 July 2009 (diff | hist) Team:Alberta/Header
- 22:18, 15 July 2009 (diff | hist) N Team:University of Alberta/15 July 2009 (New page: == The Model == The model was created by Feist 2007 et. al.<ref>A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic info...)
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