Team:BCCS-Bristol/Notebook/Week 8

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===Week 8===
 
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* pQE31-GFP was digested and ligations with digested and purified FhuA were performed.
 
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* XL1-Blue competent cells were transformed with the pQE31-GFP+FhuA ligations.
 
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* The concentration of the DNA parts that we are going to send for sequencing was determined by spectrophotometry. These parts include: AraC-RBS, AraC-RBS-FhuA/OsmE, GFP-terminator and bioscaffolds-GFP-terminator.
 
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* Liquid cultures of the bioscaffolds-GFP-terminator were prepared and minipreps performed to isolated the plasmid DNA. Then the whole bioscaffold-GFP-terminator constructs were purified by gel extraction and ligations with the AraC-RBS-FhuA/OsmE were prepared.
 
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* Overnight ligations set-up;
 
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1) AraC-RBS-FhuA-Bioscaffold-GFP-Terminator
 
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2) AraC-RBS-OsmE-Bioscaffold-GFP-Terminator
 
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* Prepare liquid cultures for pQE31-GFP-FhuA.
 
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=====Promoter-RBS-GFP-terminator ligation=====
 
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* This will be used to check that GFP works and also to check if the AraC promoter works by trying to control its level of activity using arabinose.
 
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* Restriction digest and gel purify GFP-terminator part and then ligate it to the already cut AraC-RBS on pSB1A2 plasmid.
 
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[[Image:BCCS_Arac_rbs_gfp_term.png|center|500px|frame|The figure illustrates the construct AraC-RBS-GFP-TErminator created to assess promoter activity. The ladder is 1kb DNA marker from NEB. Lanes run in triplets with Double Digest (XbaI/Osme), Single Digest(XbaI) and Uncut versions of DNA plasmids carrying the construct. Presence is illustrated by the bands created in the double digest lane (top:plasmid backbone bottom:construct)]]
 
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Latest revision as of 23:48, 20 October 2009