Team:Groningen/Brainstorm/Modelling

From 2009.igem.org

(Difference between revisions)
(Second column 2008 finished!)
(Some from the last column of 2008.)
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**[https://2008.igem.org/Team:UNIPV-Pavia/Modeling Pavia 2008], using Matlab and Simulink
**[https://2008.igem.org/Team:UNIPV-Pavia/Modeling Pavia 2008], using Matlab and Simulink
**[https://2008.igem.org/Team:University_of_Ottawa/Modeling Ottawa 2008], using Matlab
**[https://2008.igem.org/Team:University_of_Ottawa/Modeling Ottawa 2008], using Matlab
 +
**[https://2008.igem.org/Team:University_of_Washington/Modeling Washington 2008], using Mathematica
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**[https://2008.igem.org/PHA_Project_Modeling Tsinghua 2008], using Matlab
*Cell processes
*Cell processes
**[https://2008.igem.org/Modeling Calgary 2008], using their own tool (transcription and translation)
**[https://2008.igem.org/Modeling Calgary 2008], using their own tool (transcription and translation)
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*Genome Scale Model (whole cell response)
*Genome Scale Model (whole cell response)
**[https://2008.igem.org/Team:ETH_Zurich/Modeling/Genome-Scale_Model ETH Zurich 2008], using the [http://gcrg.ucsd.edu/Downloads/Cobra_Toolbox Cobra Toolbox] for Matlab
**[https://2008.igem.org/Team:ETH_Zurich/Modeling/Genome-Scale_Model ETH Zurich 2008], using the [http://gcrg.ucsd.edu/Downloads/Cobra_Toolbox Cobra Toolbox] for Matlab
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**?[https://2008.igem.org/Team:Wisconsin/Modeling Wisconsin 2008], using GAMS
*Chemostat simulation
*Chemostat simulation
**[https://2008.igem.org/Team:ETH_Zurich/Modeling/Chemostat_Selection ETH Zurich 2008], using their genome scale model data
**[https://2008.igem.org/Team:ETH_Zurich/Modeling/Chemostat_Selection ETH Zurich 2008], using their genome scale model data
*Cell movement
*Cell movement
**[https://2008.igem.org/Team:iHKU/modeling IHKU 2008], as random walks
**[https://2008.igem.org/Team:iHKU/modeling IHKU 2008], as random walks
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**[https://2008.igem.org/Team:University_of_Lethbridge/Modeling University of Lethbridge 2008], using [http://www.pdn.cam.ac.uk/groups/comp-cell/BCT.html BCT] (a tool to model the chemotaxis pathway of E. Coli?)
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**[https://2008.igem.org/Team:University_of_Lethbridge/Modeling Lethbridge 2008], using [http://www.pdn.cam.ac.uk/groups/comp-cell/BCT.html BCT] (a tool to model the chemotaxis pathway of E. Coli?)
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**[https://2008.igem.org/Chemotaxis_Modeling Tsinghua 2008], using their own code?
Other potentially interesting software tools:
Other potentially interesting software tools:

Revision as of 10:59, 22 April 2009

Software tools from previous years

Other potentially interesting software tools:

Literature

See our literature list. For our team members that are looking for books on the subject, have a look under code 605B (Bernoulliborg library, lower floor), as well as 605C/D/E (A and Z also exist but seem to be less interesting).