Team:Groningen/Notebook/19 August 2009

From 2009.igem.org

(Difference between revisions)
(New page: {{Team:Groningen/Notebook/Day/Header}} ==Wet== ===GVP Cluster=== :→ {{todo}} Restriction for Assembly :→ {{todo}} Gel purification of plasmid/insert :→ {{todo}} Ligation of GVP in...)
(GVP Cluster)
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:→ {{todo}} Transformation of E.coli TOP10 cells (kan.)
:→ {{todo}} Transformation of E.coli TOP10 cells (kan.)
:→ {{todo}} Test promoter/GVP constructs (grow precultures)
:→ {{todo}} Test promoter/GVP constructs (grow precultures)
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'''Restriction for Assembly'''
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The vector [http://partsregistry.org/wiki/index.php?title=Part:pSB3K3 pSB3K3] containing the [http://partsregistry.org/wiki/index.php?title=Part:BBa_J23109 low] constitutive promoter was cut with PstI and SpeI to create correct ends for insert of GVP biobrick [http://partsregistry.org/wiki/index.php?title=Part:BBa_I750016 BBa_I750016], which was cut with XbaI and PstI.
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* 16μL pSB3K3-L in MQ (0.8μg)
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* 2μL  Fast digest buffer
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* 1μL  PstI fast digest enzyme
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* 1μL  SpeI fast digest enzyme
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* 10μL plasmid-GVP in MQ (?μg)
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* 6μL  MQ (end volume of 20μL)
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* 2μL  Fast digest buffer
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* 1μL  PstI fast digest enzyme
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* 1μL  SpeI/XbaI fast digest enzyme
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Restriction was kept at 37C for 30 min. and put on ice until used for gel purification.
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'''Purification'''
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'''Concentrations'''
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{|cellpadding="2" cellspacing="1" border="4"
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|'''Plasmid'''
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|'''Conc. ng/μL'''
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|'''260/280 
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|'''260/230  '''
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|'''-20 box (michael
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|'''Restriction Control'''
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|-
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|pSB3K3-L (SpeI/PstI)
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|?
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|?
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|?
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|?
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|?
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|-
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|GVP (XbaI/PstI)
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|?
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|?
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|?
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|?
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|?
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|}
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'''Restriction Control'''
===Transporters===
===Transporters===

Revision as of 10:25, 19 August 2009

Igemhomelogo.png

Wet

GVP Cluster

TODO Restriction for Assembly
TODO Gel purification of plasmid/insert
TODO Ligation of GVP into vector pSB3K3
TODO Transformation of E.coli TOP10 cells (kan.)
TODO Test promoter/GVP constructs (grow precultures)

Restriction for Assembly

The vector pSB3K3 containing the low constitutive promoter was cut with PstI and SpeI to create correct ends for insert of GVP biobrick BBa_I750016, which was cut with XbaI and PstI.

  • 16μL pSB3K3-L in MQ (0.8μg)
  • 2μL Fast digest buffer
  • 1μL PstI fast digest enzyme
  • 1μL SpeI fast digest enzyme
  • 10μL plasmid-GVP in MQ (?μg)
  • 6μL MQ (end volume of 20μL)
  • 2μL Fast digest buffer
  • 1μL PstI fast digest enzyme
  • 1μL SpeI/XbaI fast digest enzyme

Restriction was kept at 37C for 30 min. and put on ice until used for gel purification.

Purification

Concentrations

Plasmid Conc. ng/μL 260/280 260/230 -20 box (michael Restriction Control
pSB3K3-L (SpeI/PstI) ? ? ? ? ?
GVP (XbaI/PstI) ? ? ? ? ?

Restriction Control

Transporters

Metal Accumulation

Vectors

Dry

April
MTWTFSS
    1 2 3 4 5
6 7 8 9 10 11 12
13 14 15 16 17 18 19
20 21 22 23 24 25 26
27 28 29 30
May
MTWTFSS
        1 2 3
4 5 6 7 8 9 10
11 12 13 14 15 16 17
18 19 20 21 22 23 24
25 26 27 28 29 30 31
June
MTWTFSS
1 2 3 4 5 6 7
8 9 10 11 12 13 14
15 16 17 18 19 20 21
22 23 24 25 26 27 28
29 30
July
MTWTFSS
    1 2 3 4 5
6 7 8 9 10 11 12
13 14 15 16 17 18 19
20 21 22 23 24 25 26
27 28 29 30 31
August
MTWTFSS
          1 2
3 4 5 6 7 8 9
10 11 12 13 14 15 16
17 18 19 20 21 22 23
24 25 26 27 28 29 30
31
September
MTWTFSS
  1 2 3 4 5 6
7 8 9 10 11 12 13
14 15 16 17 18 19 20
21 22 23 24 25 26 27
28 29 30
October
MTWTFSS
      1 2 3 4
5 6 7 8 9 10 11
12 13 14 15 16 17 18
19 20 21 22 23 24 25
26 27 28 29 30 31
November
MTWTFSS
            1
2 3 4 5 6 7 8
9 10 11 12 13 14 15
16 17 18 19 20 21 22
23 24 25 26 27 28 29
30