Team:Groningen/Notebook/5 August 2009

From 2009.igem.org

(Difference between revisions)
(Metal Accumulation)
(Metal Accumulation)
Line 139: Line 139:
:'''Tranformation'''
:'''Tranformation'''
-
::* add 4 uL of the GlpFpsB1AC3 ligation mixture to 50uL competent e.coli top10 cells.
+
::* add 4 uL of the - ligation mixture to 50uL competent e.coli top10 cells.
Incubate:
Incubate:
:::*30 min @ ice
:::*30 min @ ice
Line 146: Line 146:
::*add 800uL LB
::*add 800uL LB
:::* incubate for 1 h at 37°
:::* incubate for 1 h at 37°
-
::* plate on LB-AMP plates
+
::* plate on LB-AMP plates (one glpF 04-08 on chlorophenacol
==Dry==
==Dry==
{{Team:Groningen/Notebook/Day/Footer}}
{{Team:Groningen/Notebook/Day/Footer}}

Revision as of 13:14, 5 August 2009

Igemhomelogo.png

It's my birthday!!! (Michael)

So cake it is....

Wet

GVP Cluster

DONE buy a nice cake and eat it ;)
TODO isolate plasmids from overnight precultures
DONE perform a ligation between cut vector and GVP fragment
DONE transform E.coli TOP10 competent cells with ligation product

Ligation

  • 2 uL Ligase buffer
  • 1 ul T4 Ligase
  • 8 uL plasmid pSB1AC3 digested with PstI and SpeI
  • 4 uL insert GVP restricted with XbaI and PstI

Incubate:

  • 25°C 30min.
  • kept on ice for 10min.

Tranformation

  • add 10uL of the pSB1AC3-GVP ligation product to 50uL competent E.coli TOP10 cells.

Incubate:

  • 30 min @ ice
  • 50 sec 42°C
  • 2 min @ ice
  • add 800uL LB-medium
  • incubate for 1 h at 37°C
  • plate on LB-amp50 plates

Transporters

GlpF Restriction, ligation and transformation as noted below.

Metal Accumulation

Restriction

10 ul GlpF PCR
1.5 ul Fast DigestBuffer
0.5 ul XbaI
0.5 ul PstI
10 ul ArsRMBP fusie (ligatie overnight 04-08-09)
1.5 ul Fast DigestBuffer
0.5 ul XbaI
0.5 ul PstI
11 ul psB1AC3 (30/07/09 nienke)
5 ul Fast DigestBuffer
2.5 ul XbaI
2.5 ul PstI
  • 37 30min
  • Inactivation on Gel
  • Extraction from gel


Ligation

12 uL ArsRMBP
5 uL psB1AC3
2 uL ligase
1uL T4 ligase
2 uL Ligase buffer 16° 1h → 65° 10 min
1 ul T4 Ligase
11 uL GlpF digested with EcoRI and SpeI 42° 2 min →
11 uL psB1AC3 digested with EcoRi and SpeI
Tranformation
  • add 4 uL of the - ligation mixture to 50uL competent e.coli top10 cells.

Incubate:

  • 30 min @ ice
  • 5 min 37°
  • 5min @ ice
  • add 800uL LB
  • incubate for 1 h at 37°
  • plate on LB-AMP plates (one glpF 04-08 on chlorophenacol

Dry

April
MTWTFSS
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27 28 29 30
May
MTWTFSS
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11 12 13 14 15 16 17
18 19 20 21 22 23 24
25 26 27 28 29 30 31
June
MTWTFSS
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8 9 10 11 12 13 14
15 16 17 18 19 20 21
22 23 24 25 26 27 28
29 30
July
MTWTFSS
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6 7 8 9 10 11 12
13 14 15 16 17 18 19
20 21 22 23 24 25 26
27 28 29 30 31
August
MTWTFSS
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3 4 5 6 7 8 9
10 11 12 13 14 15 16
17 18 19 20 21 22 23
24 25 26 27 28 29 30
31
September
MTWTFSS
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7 8 9 10 11 12 13
14 15 16 17 18 19 20
21 22 23 24 25 26 27
28 29 30
October
MTWTFSS
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5 6 7 8 9 10 11
12 13 14 15 16 17 18
19 20 21 22 23 24 25
26 27 28 29 30 31
November
MTWTFSS
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2 3 4 5 6 7 8
9 10 11 12 13 14 15
16 17 18 19 20 21 22
23 24 25 26 27 28 29
30