Team:IPN-UNAM-Mexico/Notebook/July

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Contents

07-July-2009

  • Digestion of the follow biobriks with ECORI (E), SPEI (S), and XBAI (X).
Biobrick Enzime restriction
R0079 E, S
F1610 E, X
B0034 E, S
C0078 E, X
C0079 E, X
B0015 E, X


  • We propose this restrictions for standar assembly for the digest we did a 17 hours incubation at 37ºC.
  • Digest Mix:
ERCO RI - SPEI Per reaction
Plasmidic DNA 3μl
Enzima ECORI 2μl
Enzima SPEI 2μl
Buffer NBE 2μl
BSA 0.5μl
H2O 10.5μl
Total 20μl
ECORI - XBAI Per reaction
Plasmidic DNA 3μl
Enzime ECORI 2μl
Enzime XBAI 2μl
Buffer NBE 2μl
BSA 0.5μl
H20 10.5μl
Total 20μl


08-July-2009

  • Carry out the restrictions on a 10 wells agarose gel 40 min.
  • 3μl DNA 2μl Buffer.
  • We have not DNA on the Gels maybe the DNA volume is too low. We try again with 20μl DNA 3μl Buffer
  • Run on only Plasmidic DNA but we have not DNA.


09-July-2009

  • Starting again, and take off DNA from the folder plating R0079, C0178, C0179, C0060, B0034, I739001 biobriks,
  • Left 16 hours in 37ºC.


10-July-2009

We don’t have transformed cells in this point we have to delay and request 2009 catalog.



28-July-2009

With the 2009 catalog we retake the work and take on the biobriks we need. First of all we test them to be sure that the biobriks worked properly, for this we take a biobrik with RFP reporter (BBa_I3522), plate and incubate 17 hours in 37ºC.



29-July-2009

The transformation was successful we are sure the biobricks and method works and we proceed to take off our biobricks as next chart.

Number Biobrick
2 BBa_R0079
3 BBa_F1610
4 BBa_K091146
5 BBa_K093005
6 BBa_K081016
7 BBa_EC840
8 BBa_K081009
9 BBa_R0051
10 BBa_J06800
11 BBa_Q04121
12 BBa_B0034
13 BBa_C0079
14 BBa_C0179
15 BBa_B0015
16 BBa_K081018
17 BBa_K116640

For transformation we use the same method as follow.

  • Elusion: 3μl DNA from the well.
  • Put it on a Eppendorf Vial 1.5 ml with competent cells.
  • Electoporate shock to transform and recovery in LB ampr 1 hour and a half.
  • Plate on petri dishes and incubate 17 hours.


31-July-2009

  • Plated Top 10 biobricks F1610, K091146, K081016, K081009, R0051, K081018 and incubate during 17 hours



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