Team:Illinois/Modeling

From 2009.igem.org

(Difference between revisions)
(Modeling)
(Modeling)
Line 8: Line 8:
sRNA regulation is a post-transcription regulation mechanism in which the mRNA transcript is degraded before it can be translated or preventing further translation.  Traditionally regulation via sRNA is faster acting than transcription factors because there is no delay due to translation and protein folding.[[modeling_resources|[1]]] For this reason, sRNAs are often found to regulate stress and environmental responses.  For example, the sRNA, SgrS regulates PtsG, coding for two protein subunits EIIB and EIIC which are involved in the glucose phosphate stress response. [[modeling_resources|[2]]]
sRNA regulation is a post-transcription regulation mechanism in which the mRNA transcript is degraded before it can be translated or preventing further translation.  Traditionally regulation via sRNA is faster acting than transcription factors because there is no delay due to translation and protein folding.[[modeling_resources|[1]]] For this reason, sRNAs are often found to regulate stress and environmental responses.  For example, the sRNA, SgrS regulates PtsG, coding for two protein subunits EIIB and EIIC which are involved in the glucose phosphate stress response. [[modeling_resources|[2]]]
-
The rate for protein translation after sRNA regulation is governed by the following simple differential equations. N<sub>s</sub> : Number of sRNA transcripts
+
The rate for protein translation after sRNA regulation is governed by the following simple differential equations.  
 +
 
 +
N<sub>s</sub> : Number of sRNA transcripts
N<sub>m</sub> : Number of mRNA transcripts
N<sub>m</sub> : Number of mRNA transcripts

Revision as of 01:14, 19 June 2009

Click to go to the Illinois home page





Modeling

sRNA regulation is a post-transcription regulation mechanism in which the mRNA transcript is degraded before it can be translated or preventing further translation. Traditionally regulation via sRNA is faster acting than transcription factors because there is no delay due to translation and protein folding.[1] For this reason, sRNAs are often found to regulate stress and environmental responses. For example, the sRNA, SgrS regulates PtsG, coding for two protein subunits EIIB and EIIC which are involved in the glucose phosphate stress response. [2]

The rate for protein translation after sRNA regulation is governed by the following simple differential equations.

Ns : Number of sRNA transcripts

Nm : Number of mRNA transcripts

Np : Number of expressed protein


SRNAdegradationmodel.png

[1]

Questions about our Wiki page? Please email Dave Korenchan at korench1@illinois.edu.