Team:KULeuven/Modeling/Blue Light Receptor

From 2009.igem.org

(Difference between revisions)
(Mathematical Model)
(Blue light Sensor)
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[[Image:Bls.JPG|center|thumb|600px|Regulation of the production of mRNA key by incident blue light]]
[[Image:Bls.JPG|center|thumb|600px|Regulation of the production of mRNA key by incident blue light]]
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===Dimerization of YcgF===
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==Simulation==
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"Transient Dimerization and Conformational Change of a BLUF Protein:  YcgF", [http://pubs.acs.org/doi/full/10.1021/ja065682q]
 
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[[Image:YcgFdimerization.gif|center|thumb|450px|Sensor interface]]
 
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"Light Induced Structural Changes of a Full-length Protein and Its BLUF Domain in
 
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YcgF(Blrp), a Blue-Light Sensing Protein That Uses FAD (BLUF)"
 
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[http://pubs.acs.org/doi/abs/10.1021/bi051820x]
 
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"Influence of a Joining Helix on the BLUF Domain of the
 
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YcgF Photoreceptor from Escherichia coli"
 
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[http://www3.interscience.wiley.com/cgi-bin/fulltext/121407023/PDFSTART]
 
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===YcgF - YcgE interaction===
 
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"The BLUF-EAL protein YcgF acts as a direct anti-repressor in a blue-light response of Escherichia coli"
 
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[http://genesdev.cshlp.org/content/23/4/522.full.pdf+html]
 
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===Transcription of the RIBOKEY===
 
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https://2008.igem.org/Team:KULeuven/Model/Filter
 
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===Degradation of the RIBOKEY===
 
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https://2008.igem.org/Team:KULeuven/Model/Filter
 
==References==
==References==

Revision as of 14:11, 16 September 2009

Contents

Blue light Sensor

Biological Model

Biologie blue light.png

Mathematical Model

Regulation of the production of mRNA key by incident blue light

Simulation

References

[1] Natalia Tschowri, Susan Busse and Regine Hengge, "The BLUF-EAL protein YcgF acts as a direct anti-repressor in a blue-light response of Escherichia coli"

[2] Y. Nakasone et al., "Transient Dimerization and Conformational Change of a BLUF Protein: YcgF", Journal of the American Chemical Society, Apr. 2006