Team:Paris/Addressing overview3

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(Difference between revisions)
(Adressing the message in the outer membrane : ClyA)
(Adressing the message in the outer membrane : ClyA)
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In this part we look into adressing a protein into the sender outer membrane that could be incoporated into outer membrane vesicles (OMVs). This protein would then be able to transmit a message after the fusion of OMVs with a receiver cell.
In this part we look into adressing a protein into the sender outer membrane that could be incoporated into outer membrane vesicles (OMVs). This protein would then be able to transmit a message after the fusion of OMVs with a receiver cell.
-
In this direction ClyA (the cytolysine A of E.Coli) seems to be a good candidate. ClyA is one of the proteins that has been previously detected into OMVs and is known to be specificly exported to the outer membrane [[http://www.ncbi.nlm.nih.gov/pubmed/14532000 [3]]]. ClyA is thus expressed on bacteria and OMVs surface. Moreover, when ClyA is overproduced, it is accumulated into the periplasmic space [[http://www.ncbi.nlm.nih.gov/pubmed/14532000 [3]]].
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In this direction ClyA (the cytolysine A of E.Coli) seems to be a good candidate. ClyA is one of the proteins that has been previously detected into OMVs and is known to be specificly exported to the outer membrane [http://www.ncbi.nlm.nih.gov/pubmed/14532000 [3]]. ClyA is thus expressed on bacteria and OMVs surface. Moreover, when ClyA is overproduced, it is accumulated into the periplasmic space [http://www.ncbi.nlm.nih.gov/pubmed/14532000 [3]].
-
However there is an inconvenient to use this protein. ClyA is an alpha-Pore Forming Toxin (PFT). PFT are widely distributed proteins which form lesions in biological membranes. They exhibit their toxic effect in different manner. The first one is that ClyA allows the destruction of membrane permeability barrier. Furthermore, the toxic effect of ClyA could be explain by its capacity to deliver toxic component after the assembly of 8 or 13 of its subunits. PFTs can be subdivided into two classes; α-PFTs and β-PFTs, depending on the suspected mode of membrane integration, either by α-helical or β-sheet elements.[[http://www.ncbi.nlm.nih.gov/pubmed/19421192 [2]]]
+
However there is an inconvenient to use this protein. ClyA is an alpha-Pore Forming Toxin (PFT). PFT are widely distributed proteins which form lesions in biological membranes. They exhibit their toxic effect in different manner. The first one is that ClyA allows the destruction of membrane permeability barrier. Furthermore, the toxic effect of ClyA could be explain by its capacity to deliver toxic component after the assembly of 8 or 13 of its subunits. PFTs can be subdivided into two classes; α-PFTs and β-PFTs, depending on the suspected mode of membrane integration, either by α-helical or β-sheet elements.[http://www.ncbi.nlm.nih.gov/pubmed/19421192 [2]]
[[Image:Clya_simple.jpg|ClyA subunit|150px|left]] [[Image:Clya_structure2.jpg|ClyA assembled|100px|right]][[Image:ClyA.jpg|ClyA are assembling in outer membrane of a host cell|150px|center]]  [[Image:Clya_structure.jpg|ClyA assembled|150px|center]]
[[Image:Clya_simple.jpg|ClyA subunit|150px|left]] [[Image:Clya_structure2.jpg|ClyA assembled|100px|right]][[Image:ClyA.jpg|ClyA are assembling in outer membrane of a host cell|150px|center]]  [[Image:Clya_structure.jpg|ClyA assembled|150px|center]]
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Kim et al. have successfully fused clyA to GFP in order to observe vesicles [[http://www.ncbi.nlm.nih.gov/pubmed/18511069 [1]]], so we know that we can try to fuse clyA to a protein domain that would induce a signal transduction into the receiver cell. To see how we want to exploite clyA properties see [https://2009.igem.org/Team:Paris/Addressing_overview2_strategy#Overview our strategy].
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Kim et al. have successfully fused clyA to GFP in order to observe vesicles [http://www.ncbi.nlm.nih.gov/pubmed/18511069 [1]], so we know that we can try to fuse clyA to a protein domain that would induce a signal transduction into the receiver cell. To see how we want to exploite clyA properties see [https://2009.igem.org/Team:Paris/Addressing_overview2_strategy#Overview our strategy].
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'''Source:'''
 
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[http://www.ncbi.nlm.nih.gov/pubmed/18511069 1-]Kim, J.-Y. & DeLisa, M.P. Engineered bacterial outer membrane vesicles with enhanced functionality J.Mol. Biol. (2008) 380, 51–66
 
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[http://www.ncbi.nlm.nih.gov/pubmed/19421192 2-]Muller, M. & Ban, N. The structure of a cytolytic a-helical toxin pore reveals its assembly mechanism Nature (4 June 2009) 459, 726-730
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====Bibliography :====
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[http://www.ncbi.nlm.nih.gov/pubmed/14532000 3-]Wai, S.N. & Lindmark, B. Vesicle-Mediated Export and Assembly of Pore-Forming Oligomers of the Enterobacterial ClyA Cytotoxin Cell (October 2003), 115,25-35
+
[http://www.ncbi.nlm.nih.gov/pubmed/18511069 [1]]Kim, J.-Y. & DeLisa, M.P. Engineered bacterial outer membrane vesicles with enhanced functionality J.Mol. Biol. (2008) 380, 51–66
 +
[http://www.ncbi.nlm.nih.gov/pubmed/19421192 [2]]Muller, M. & Ban, N. The structure of a cytolytic a-helical toxin pore reveals its assembly mechanism Nature (4 June 2009) 459, 726-730
-
[http://www.ncbi.nlm.nih.gov/pubmed/10383763 4-] Oscarsson, J. & Uhlin, B.E. Molecular analysis of the cytolytic protein ClyA (SheA) from Escherichia coli Molecular Microbiology (1999) 32(6), 1226–1238
+
[http://www.ncbi.nlm.nih.gov/pubmed/14532000 [3]]Wai, S.N. & Lindmark, B. Vesicle-Mediated Export and Assembly of Pore-Forming Oligomers of the Enterobacterial ClyA Cytotoxin Cell (October 2003), 115,25-35
 +
[http://www.ncbi.nlm.nih.gov/pubmed/10383763 [4]] Oscarsson, J. & Uhlin, B.E. Molecular analysis of the cytolytic protein ClyA (SheA) from Escherichia coli Molecular Microbiology (1999) 32(6), 1226–1238
-
[http://jb.asm.org/cgi/content/abstract/182/22/6347 5-] Westermark, M. & Uhlin, B.E.  Silencing and Activation of ClyA Cytotoxin Expression in Escherichia coli Journal of bacteriology,(Nov. 2000), Vol. 182, No. 22 6347–6357
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[http://jb.asm.org/cgi/content/abstract/182/22/6347 [5]] Westermark, M. & Uhlin, B.E.  Silencing and Activation of ClyA Cytotoxin Expression in Escherichia coli Journalof bacteriology,(Nov. 2000), Vol. 182, No. 22 6347–6357
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{{Template:Paris2009_guided|Addressing_overview2#bottom|Addressing_overview4#bottom}}

Revision as of 23:41, 21 October 2009


Adressing the message in the outer membrane : ClyA

We work on the cell-cell communication using vesicle:
In this part we look into adressing a protein into the sender outer membrane that could be incoporated into outer membrane vesicles (OMVs). This protein would then be able to transmit a message after the fusion of OMVs with a receiver cell.

In this direction ClyA (the cytolysine A of E.Coli) seems to be a good candidate. ClyA is one of the proteins that has been previously detected into OMVs and is known to be specificly exported to the outer membrane [3]. ClyA is thus expressed on bacteria and OMVs surface. Moreover, when ClyA is overproduced, it is accumulated into the periplasmic space [3].


However there is an inconvenient to use this protein. ClyA is an alpha-Pore Forming Toxin (PFT). PFT are widely distributed proteins which form lesions in biological membranes. They exhibit their toxic effect in different manner. The first one is that ClyA allows the destruction of membrane permeability barrier. Furthermore, the toxic effect of ClyA could be explain by its capacity to deliver toxic component after the assembly of 8 or 13 of its subunits. PFTs can be subdivided into two classes; α-PFTs and β-PFTs, depending on the suspected mode of membrane integration, either by α-helical or β-sheet elements.[2]

ClyA subunit
ClyA assembled
ClyA are assembling in outer membrane of a host cell
ClyA assembled



Some article argue that E.Coli K12 use this ClyA to lyse other cell (specially mamalian cell or eurcaryote cell[3]). But E. coli cells expressing clyA do not lyse each other.


Kim et al. have successfully fused clyA to GFP in order to observe vesicles [1], so we know that we can try to fuse clyA to a protein domain that would induce a signal transduction into the receiver cell. To see how we want to exploite clyA properties see our strategy.



Bibliography :

[1]Kim, J.-Y. & DeLisa, M.P. Engineered bacterial outer membrane vesicles with enhanced functionality J.Mol. Biol. (2008) 380, 51–66

[2]Muller, M. & Ban, N. The structure of a cytolytic a-helical toxin pore reveals its assembly mechanism Nature (4 June 2009) 459, 726-730

[3]Wai, S.N. & Lindmark, B. Vesicle-Mediated Export and Assembly of Pore-Forming Oligomers of the Enterobacterial ClyA Cytotoxin Cell (October 2003), 115,25-35

[4] Oscarsson, J. & Uhlin, B.E. Molecular analysis of the cytolytic protein ClyA (SheA) from Escherichia coli Molecular Microbiology (1999) 32(6), 1226–1238

[5] Westermark, M. & Uhlin, B.E. Silencing and Activation of ClyA Cytotoxin Expression in Escherichia coli Journalof bacteriology,(Nov. 2000), Vol. 182, No. 22 6347–6357


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